Igor Vorobyov
Igor Vorobyov
University of California Davis, School of Medicine, Departments of Physiology and Membrane Biology
Verified email at ucdavis.edu
Title
Cited by
Cited by
Year
CHARMM general force field: A force field for drug‐like molecules compatible with the CHARMM all‐atom additive biological force fields
K Vanommeslaeghe, E Hatcher, C Acharya, S Kundu, S Zhong, J Shim, ...
Journal of computational chemistry 31 (4), 671-690, 2010
36082010
Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types
JB Klauda, RM Venable, JA Freites, JW O’Connor, DJ Tobias, ...
The journal of physical chemistry B 114 (23), 7830-7843, 2010
27502010
A polarizable model of water for molecular dynamics simulations of biomolecules
G Lamoureux, E Harder, IV Vorobyov, B Roux, AD MacKerell Jr
Chemical Physics Letters 418 (1-3), 245-249, 2006
5332006
Simulating monovalent and divalent ions in aqueous solution using a Drude polarizable force field
H Yu, TW Whitfield, E Harder, G Lamoureux, I Vorobyov, VM Anisimov, ...
Journal of chemical theory and computation 6 (3), 774-786, 2010
3662010
Determination of electrostatic parameters for a polarizable force field based on the classical Drude oscillator
VM Anisimov, G Lamoureux, IV Vorobyov, N Huang, B Roux, ...
Journal of chemical theory and computation 1 (1), 153-168, 2005
3022005
Additive and classical drude polarizable force fields for linear and cyclic ethers
I Vorobyov, VM Anisimov, S Greene, RM Venable, A Moser, RW Pastor, ...
Journal of chemical theory and computation 3 (3), 1120-1133, 2007
2512007
Polarizable empirical force field for alkanes based on the classical drude oscillator model
IV Vorobyov, VM Anisimov, AD MacKerell
The Journal of Physical Chemistry B 109 (40), 18988-18999, 2005
2112005
The different interactions of lysine and arginine side chains with lipid membranes
L Li, I Vorobyov, TW Allen
The journal of physical chemistry B 117 (40), 11906-11920, 2013
1872013
Polarizable empirical force field for the primary and secondary alcohol series based on the classical Drude model
VM Anisimov, IV Vorobyov, B Roux, AD MacKerell
Journal of chemical theory and computation 3 (6), 1927-1946, 2007
1592007
Atomic level anisotropy in the electrostatic modeling of lone pairs for a polarizable force field based on the classical Drude oscillator
E Harder, VM Anisimov, IV Vorobyov, PEM Lopes, SY Noskov, ...
Journal of chemical theory and computation 2 (6), 1587-1597, 2006
1472006
Potential of Mean Force and pKa Profile Calculation for a Lipid Membrane-Exposed Arginine Side Chain
L Li, I Vorobyov, TW Allen
The journal of physical chemistry B 112 (32), 9574-9587, 2008
1222008
Hydrogen bonding in monomers and dimers of 2-aminoethanol
I Vorobyov, MC Yappert, DB DuPré
The Journal of Physical Chemistry A 106 (4), 668-679, 2002
1222002
Assessing atomistic and coarse-grained force fields for protein− lipid interactions: the formidable challenge of an ionizable side chain in a membrane
I Vorobyov, L Li, TW Allen
The journal of physical chemistry B 112 (32), 9588-9602, 2008
1072008
Conformational studies of sphingolipids by NMR spectroscopy. II. Sphingomyelin
CM Talbott, I Vorobyov, D Borchman, KG Taylor, DB DuPré, MC Yappert
Biochimica et Biophysica Acta (BBA)-Biomembranes 1467 (2), 326-337, 2000
1072000
Is arginine charged in a membrane?
L Li, I Vorobyov, AD MacKerell Jr, TW Allen
Biophysical journal 94 (2), L11-L13, 2008
992008
Glycero-versus sphingo-phospholipids: correlations with human and non-human mammalian lens growth
MC Yappert, M Rujoi, D Borchman, I Vorobyov, R Estrada
Experimental eye research 76 (6), 725-734, 2003
912003
Ion conduction and conformational flexibility of a bacterial voltage-gated sodium channel
C Boiteux, I Vorobyov, TW Allen
Proceedings of the National Academy of Sciences 111 (9), 3454-3459, 2014
872014
Ion-induced defect permeation of lipid membranes
I Vorobyov, TE Olson, JH Kim, RE Koeppe Ii, OS Andersen, TW Allen
Biophysical journal 106 (3), 586-597, 2014
862014
Local anesthetic and antiepileptic drug access and binding to a bacterial voltage-gated sodium channel
C Boiteux, I Vorobyov, RJ French, C French, V Yarov-Yarovoy, TW Allen
Proceedings of the National Academy of Sciences 111 (36), 13057-13062, 2014
712014
The role of membrane thickness in charged protein–lipid interactions
LB Li, I Vorobyov, TW Allen
Biochimica et Biophysica Acta (BBA)-Biomembranes 1818 (2), 135-145, 2012
712012
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Articles 1–20