Nicole Koropatkin
Nicole Koropatkin
Assistant Professor of Microbiology and Immunology, University of MI Medical School
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A dietary fiber-deprived gut microbiota degrades the colonic mucus barrier and enhances pathogen susceptibility
MS Desai, AM Seekatz, NM Koropatkin, N Kamada, CA Hickey, M Wolter, ...
Cell 167 (5), 1339-1353. e21, 2016
How glycan metabolism shapes the human gut microbiota
NM Koropatkin, EA Cameron, EC Martens
Nature Reviews Microbiology 10 (5), 323-335, 2012
Complex glycan catabolism by the human gut microbiota: the Bacteroidetes Sus-like paradigm
EC Martens, NM Koropatkin, TJ Smith, JI Gordon
Journal of Biological Chemistry 284 (37), 24673-24677, 2009
A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes
J Larsbrink, TE Rogers, GR Hemsworth, LS McKee, AS Tauzin, O Spadiut, ...
Nature 506 (7489), 498-502, 2014
Polysaccharide degradation by the intestinal microbiota and its influence on human health and disease
DW Cockburn, NM Koropatkin
Journal of molecular biology 428 (16), 3230-3252, 2016
Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices
NM Koropatkin, EC Martens, JI Gordon, TJ Smith
Structure 16 (7), 1105-1115, 2008
The Sus operon: a model system for starch uptake by the human gut Bacteroidetes
MH Foley, DW Cockburn, NM Koropatkin
Cellular and Molecular Life Sciences 73 (14), 2603-2617, 2016
SusG: a unique cell-membrane-associated α-amylase from a prominent human gut symbiont targets complex starch molecules
NM Koropatkin, TJ Smith
Structure 18 (2), 200-215, 2010
Unique Organization of Extracellular Amylases into Amylosomes in the Resistant Starch-Utilizing Human Colonic Firmicutes Bacterium Ruminococcus bromii
X Ze, Y Ben David, JA Laverde-Gomez, B Dassa, PO Sheridan, ...
MBio 6 (5), e01058-15, 2015
Dynamic responses of Bacteroides thetaiotaomicron during growth on glycan mixtures
TE Rogers, NA Pudlo, NM Koropatkin, JSK Bell, M Moya Balasch, ...
Molecular microbiology 88 (5), 876-890, 2013
Multidomain carbohydrate-binding proteins involved in Bacteroides thetaiotaomicron starch metabolism
EA Cameron, MA Maynard, CJ Smith, TJ Smith, NM Koropatkin, ...
Journal of Biological Chemistry 287 (41), 34614-34625, 2012
Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale
DW Cockburn, NI Orlovsky, MH Foley, KJ Kwiatkowski, CM Bahr, ...
Molecular microbiology 95 (2), 209-230, 2015
Ruminococcal cellulosome systems from rumen to human
Y Ben David, B Dassa, I Borovok, R Lamed, NM Koropatkin, EC Martens, ...
Environmental microbiology 17 (9), 3407-3426, 2015
The structure of a cyanobacterial bicarbonate transport protein, CmpA
NM Koropatkin, DW Koppenaal, HB Pakrasi, TJ Smith
Journal of Biological Chemistry 282 (4), 2606-2614, 2007
Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity
NM Koropatkin, HB Pakrasi, TJ Smith
Proceedings of the National Academy of Sciences 103 (26), 9820-9825, 2006
Galactomannan catabolism conferred by a polysaccharide utilization locus of Bacteroides ovatus: enzyme synergy and crystal structure of a β-mannanase
V Bågenholm, SK Reddy, H Bouraoui, J Morrill, E Kulcinskaja, CM Bahr, ...
Journal of Biological Chemistry 292 (1), 229-243, 2017
A polysaccharide utilization locus from Flavobacterium johnsoniae enables conversion of recalcitrant chitin
J Larsbrink, Y Zhu, SS Kharade, KJ Kwiatkowski, VGH Eijsink, ...
Biotechnology for biofuels 9 (1), 1-16, 2016
Starch digestion by gut bacteria: crowdsourcing for carbs
FM Cerqueira, AL Photenhauer, RM Pollet, HA Brown, NM Koropatkin
Trends in Microbiology 28 (2), 95-108, 2020
Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch‐degrader Ruminococcus bromii
I Mukhopadhya, S Moraïs, J Laverde‐Gomez, PO Sheridan, AW Walker, ...
Environmental microbiology 20 (1), 324-336, 2018
Enzymatic profiling of cellulosomal enzymes from the human gut bacterium, Ruminococcus champanellensis, reveals a fine‐tuned system for cohesin‐dockerin …
S Moraïs, YB David, L Bensoussan, SH Duncan, NM Koropatkin, ...
Environmental microbiology 18 (2), 542-556, 2016
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