Shuai Cheng Li
Shuai Cheng Li
Department of Computer Science, City University of Hong Kong
Verified email at cityu.edu.hk - Homepage
TitleCited byYear
Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization
C Qin, C Yu, Y Shen, X Fang, L Chen, J Min, J Cheng, S Zhao, M Xu, ...
Proceedings of the National Academy of Sciences 111 (14), 5135-5140, 2014
3532014
Genome-wide profiling of HPV integration in cervical cancer identifies clustered genomic hot spots and a potential microhomology-mediated integration mechanism
Z Hu, D Zhu, W Wang, W Li, W Jia, X Zeng, W Ding, L Yu, X Wang, ...
Nature genetics 47 (2), 158, 2015
1892015
Evaporation of droplets on superhydrophobic surfaces: Surface roughness and small droplet size effects
X Chen, R Ma, J Li, C Hao, W Guo, BL Luk, SC Li, S Yao, Z Wang
Physical review letters 109 (11), 116101, 2012
1312012
Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies
X Li, D Fan, W Zhang, G Liu, L Zhang, L Zhao, X Fang, L Chen, Y Dong, ...
Nature communications 6, 8212, 2015
1012015
Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax
X Fang, E Nevo, L Han, EY Levanon, J Zhao, A Avivi, D Larkin, X Jiang, ...
Nature communications 5, 3966, 2014
862014
Fragment‐HMM: A new approach to protein structure prediction
SC Li, D Bu, J Xu, M Li
Protein Science 17 (11), 1925-1934, 2008
672008
Whole-genome sequencing reveals diverse models of structural variations in esophageal squamous cell carcinoma
C Cheng, Y Zhou, H Li, T Xiong, S Li, Y Bi, P Kong, F Wang, H Cui, Y Li, ...
The American Journal of Human Genetics 98 (2), 256-274, 2016
542016
Calibur: a tool for clustering large numbers of protein decoys
SC Li, YK Ng
Bmc Bioinformatics 11 (1), 25, 2010
452010
Indexing DNA sequences using q-grams
X Cao, SC Li, AKH Tung
International Conference on Database Systems for Advanced Applications, 4-16, 2005
412005
Discriminative learning for protein conformation sampling
F Zhao, S Li, BW Sterner, J Xu
Proteins: Structure, Function, and Bioinformatics 73 (1), 228-240, 2008
402008
Pedigree reconstruction using identity by descent
B Kirkpatrick, SC Li, RM Karp, E Halperin
Journal of Computational Biology 18 (11), 1481-1493, 2011
342011
Genome of the pitcher plant Cephalotus reveals genetic changes associated with carnivory
K Fukushima, X Fang, D Alvarez-Ponce, H Cai, L Carretero-Paulet, ...
Nature ecology & evolution 1 (3), 0059, 2017
292017
A comprehensive characterization of simple sequence repeats in pepper genomes provides valuable resources for marker development in Capsicum
J Cheng, Z Zhao, B Li, C Qin, Z Wu, DL Trejo-Saavedra, X Luo, J Cui, ...
Scientific reports 6, 18919, 2016
292016
Error tolerant NMR backbone resonance assignment and automated structure generation
B Alipanahi, X Gao, E Karakoc, SC Li, F Balbach, G Feng, L Donaldson, ...
Journal of bioinformatics and computational biology 9 (01), 15-41, 2011
262011
FALCON@ home: a high-throughput protein structure prediction server based on remote homologue recognition
C Wang, H Zhang, WM Zheng, D Xu, J Zhu, B Wang, K Ning, S Sun, SC Li, ...
Bioinformatics 32 (3), 462-464, 2015
212015
Piers: an efficient model for similarity search in DNA sequence databases
X Cao, SC Li, BC Ooi, AKH Tung
ACM Sigmod Record 33 (2), 39-44, 2004
202004
Designing succinct structural alphabets
SC Li, D Bu, X Gao, J Xu, M Li
Bioinformatics 24 (13), i182-i189, 2008
192008
others. 2015
J Huang, A Nummenmaa, T Witzel, T Duval, J Cohen-Adad, LL Wald
Natural-hydraulic fracture interaction: Microseismic observations and …, 0
17*
Protein secondary structure prediction using NMR chemical shift data
Y Zhao, B Alipanahi, SC Li, M Li
Journal of bioinformatics and computational biology 8 (05), 867-884, 2010
162010
Mycoplasma pneumoniae and Streptococcus pneumoniae caused different microbial structure and correlation network in lung microbiota
H Wang, W Dai, C Qiu, S Li, W Wang, J Xu, Z Li, H Wang, Y Li, Z Yang, ...
Journal of thoracic disease 8 (6), 1316, 2016
152016
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