Darrell Cockburn
Darrell Cockburn
Assistant Professor, Pennsylvania State University
Verified email at - Homepage
Cited by
Cited by
Polysaccharide degradation by the intestinal microbiota and its influence on human health and disease
DW Cockburn, NM Koropatkin
Journal of molecular biology 428 (16), 3230-3252, 2016
The Sus operon: a model system for starch uptake by the human gut Bacteroidetes
MH Foley, DW Cockburn, NM Koropatkin
Cellular and Molecular Life Sciences 73 (14), 2603-2617, 2016
Resistant starch: impact on the gut microbiome and health
P DeMartino, DW Cockburn
Current opinion in biotechnology 61, 66-71, 2020
Molecular details of a starch utilization pathway in the human gut symbiont Eubacterium rectale
DW Cockburn, NI Orlovsky, MH Foley, KJ Kwiatkowski, CM Bahr, ...
Molecular microbiology 95 (2), 209-230, 2015
Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch‐degrader Ruminococcus bromii
I Mukhopadhya, S Mora´s, J Laverde‐Gomez, PO Sheridan, AW Walker, ...
Environmental microbiology 20 (1), 324-336, 2018
Analysis of surface binding sites (SBSs) in carbohydrate active enzymes with focus on glycoside hydrolase families 13 and 77—a mini-review
D Cockburn, C Wilkens, C Ruzanski, S Andersen, JW Nielsen, A Smith, ...
Biologia 69 (6), 705-712, 2014
Surface binding sites in amylase have distinct roles in recognition of starch structure motifs and degradation
D Cockburn, MM Nielsen, C Christiansen, JM Andersen, JB Rannes, ...
International journal of biological macromolecules 75, 338-345, 2015
Novel carbohydrate binding modules in the surface anchored α‐amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by thisá…
DW Cockburn, C Suh, KP Medina, RM Duvall, Z Wawrzak, B Henrissat, ...
Molecular microbiology 107 (2), 249-264, 2018
Function of penicillin-binding protein 2 in viability and morphology of Pseudomonas aeruginosa
BA Legaree, K Daniels, JT Weadge, D Cockburn, AJ Clarke
Journal of antimicrobial chemotherapy 59 (3), 411-424, 2007
A bacterial glucanotransferase can replace the complex maltose metabolism required for starch to sucrose conversion in leaves at night
C Ruzanski, J Smirnova, M Rejzek, D Cockburn, HL Pedersen, M Pike, ...
Journal of Biological Chemistry 288 (40), 28581-28598, 2013
Direct visualization of the enzymatic digestion of a single fiber of native cellulose in an aqueous environment by atomic force microscopy
A Quirk, J Lipkowski, C Vandenende, D Cockburn, AJ Clarke, JR Dutcher, ...
Langmuir 26 (7), 5007-5013, 2010
Modulating the pH-activity profile of cellulase A from Cellulomonas fimi by replacement of surface residues
DW Cockburn, AJ Clarke
Protein Engineering, Design & Selection 24 (5), 429-437, 2011
Surface binding sites in carbohydrate active enzymes: an emerging picture of structural and functional diversity
D Cockburn, B Svensson
Carbohydrate Chemistry 39, 204-221, 2013
An efficient arabinoxylan-debranching α-L-arabinofuranosidase of family GH62 from Aspergillus nidulans contains a secondary carbohydrate binding site
C Wilkens, S Andersen, BO Petersen, A Li, M Busse-Wicher, J Birch, ...
Applied microbiology and biotechnology 100 (14), 6265-6277, 2016
Modulating the pH− Activity Profile of Cellulase by Substitution: Replacing the General Base Catalyst Aspartate with Cysteinesulfinate in Cellulase A from Cellulomonas fimi
DW Cockburn, C Vandenende, AJ Clarke
Biochemistry 49 (9), 2042-2050, 2010
Using carbohydrate interaction assays to reveal novel binding sites in carbohydrate active enzymes
D Cockburn, C Wilkens, A Dilokpimol, H Nakai, A Lewińska, ...
PLoS One 11 (8), e0160112, 2016
Lysozyme activity of the Ruminococcus champanellensis cellulosome
S Mora´s, DW Cockburn, Y Ben‐David, NM Koropatkin, EC Martens, ...
Environmental microbiology 18 (12), 5112-5122, 2016
Binding Interactions Between α-glucans from Lactobacillus reuteri and Milk Proteins Characterised by Surface Plasmon Resonance
SK Diemer, B Svensson, LN Babol, D Cockburn, P Grijpstra, L Dijkhuizen, ...
Food Biophysics 7 (3), 220-226, 2012
Structural basis for the flexible recognition of α‐glucan substrates by Bacteroides thetaiotaomicron SusG
G Arnal, DW Cockburn, H Brumer, NM Koropatkin
Protein Science 27 (6), 1093-1101, 2018
Structure and functional roles of surface binding sites in amylolytic enzymes
D Cockburn, B Svensson
Understanding Enzymes, 267-96, 2016
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