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Payal Chatterjee
Payal Chatterjee
Principal Scientist, Computational Chemistry, Cogent Biosciences
Verified email at cogentbio.com
Title
Cited by
Cited by
Year
Can relative binding free energy predict selectivity of reversible covalent inhibitors?
P Chatterjee, WM Botello-Smith, H Zhang, L Qian, A Alsamarah, D Kent, ...
Journal of the American Chemical Society 139 (49), 17945-17952, 2017
492017
Molecular mechanism of resveratrol’s lipid membrane protection
Q Fei, D Kent, WM Botello-Smith, F Nur, S Nur, A Alsamarah, P Chatterjee, ...
Scientific reports 8 (1), 1587, 2018
452018
Ranking reversible covalent drugs: from free energy perturbation to fragment docking
H Zhang, W Jiang, P Chatterjee, Y Luo
Journal of chemical information and modeling 59 (5), 2093-2102, 2019
442019
CHARMM‐GUI Drude prepper for molecular dynamics simulation using the classical Drude polarizable force field
AA Kognole, J Lee, SJ Park, S Jo, P Chatterjee, JA Lemkul, J Huang, ...
Journal of computational chemistry 43 (5), 359-375, 2022
262022
Toward prediction of electrostatic parameters for force fields that explicitly treat electronic polarization
E Heid, M Fleck, P Chatterjee, C Schröder, AD MacKerell Jr
Journal of chemical theory and computation 15 (4), 2460-2469, 2019
252019
Harnessing deep learning for optimization of lennard-jones parameters for the polarizable classical drude oscillator force field
P Chatterjee, MY Sengul, A Kumar, AD MacKerell Jr
Journal of chemical theory and computation 18 (4), 2388-2407, 2022
192022
Deep neural network model to predict the electrostatic parameters in the polarizable classical Drude oscillator force field
A Kumar, P Pandey, P Chatterjee, AD MacKerell Jr
Journal of chemical theory and computation 18 (3), 1711-1725, 2022
172022
Effects of bioactive constituents in the Traditional Chinese Medicinal formula Si–Wu–Tang on Nrf2 signaling and neoplastic cellular transformation
MM Liu, KM Huang, L Qian, P Chatterjee, S Zhang, R Li, S Zhou, Z Wang, ...
Phytomedicine 40, 1-9, 2018
172018
Polymodal allosteric regulation of Type 1 Serine/Threonine Kinase Receptors via a conserved electrostatic lock
WM Botello-Smith, A Alsamarah, P Chatterjee, C Xie, JJ Lacroix, J Hao, ...
PLoS Computational Biology 13 (8), e1005711, 2017
162017
The connexin26 human mutation N14K disrupts cytosolic intersubunit interactions and promotes channel opening
JM Valdez Capuccino, P Chatterjee, IE García, WM Botello-Smith, ...
Journal of General Physiology 151 (3), 328-341, 2019
152019
Solvation dynamics: improved reproduction of the time-dependent Stokes shift with polarizable empirical force field chromophore models
E Heid, S Schmode, P Chatterjee, AD MacKerell, C Schröder
Physical Chemistry Chemical Physics 21 (32), 17703-17710, 2019
112019
Drude polarizable lipid force field with explicit treatment of long-range dispersion: Parametrization and validation for saturated and monounsaturated zwitterionic lipids
Y Yu, RM Venable, J Thirman, P Chatterjee, A Kumar, RW Pastor, B Roux, ...
Journal of Chemical Theory and Computation 19 (9), 2590-2605, 2023
102023
Overlapping structure features selection in linear and non-linear QSAR
M Ojha, M Yadav, A Nayarisseri, J Prajapati, N Pandey, P Chatterjee
journal of pharmacy research 6 (1), 183-187, 2013
42013
Cancer cell metabolism featuring Nrf2
P Chatterjee, M Yadav, N Chauhan, Y Huang, Y Luo
Current Drug Discovery Technologies 17 (3), 263-271, 2020
32020
A Nexus model of cellular transition in cancer
M Yadav, P Chatterjee, S Tolani, J Kulkarni, M Mulye, N Chauhan, ...
Biological Research 51 (1), 23, 2018
22018
Nitro-benzylideneoxymorphone, a bifunctional mu and delta opioid receptor ligand with high mu opioid receptor efficacy
KM Olson, AL Devereaux, P Chatterjee, SL Saldaña-Shumaker, A Shafer, ...
Frontiers in Pharmacology 14, 1230053, 2023
12023
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