| Deep learning in biomedicine M Wainberg, D Merico, A Delong, BJ Frey Nature biotechnology 36 (9), 829-838, 2018 | 158 | 2018 |
| Opportunities and challenges for transcriptome-wide association studies M Wainberg, N Sinnott-Armstrong, N Mancuso, AN Barbeira, DA Knowles, ... Nature genetics 51 (4), 592-599, 2019 | 152 | 2019 |
| Genome-scale measurement of off-target activity using Cas9 toxicity in high-throughput screens DW Morgens, M Wainberg, EA Boyle, O Ursu, CL Araya, CK Tsui, ... Nature communications 8 (1), 1-8, 2017 | 140 | 2017 |
| Discovery of common and rare genetic risk variants for colorectal cancer JR Huyghe, SA Bien, TA Harrison, HM Kang, S Chen, SL Schmit, ... Nature genetics 51 (1), 76-87, 2019 | 114 | 2019 |
| Are random forests truly the best classifiers? M Wainberg, B Alipanahi, BJ Frey The Journal of Machine Learning Research 17 (1), 3837-3841, 2016 | 93 | 2016 |
| CRISPR screens in cancer spheroids identify 3D growth-specific vulnerabilities K Han, SE Pierce, A Li, K Spees, GR Anderson, JA Seoane, YH Lo, ... Nature 580 (7801), 136-141, 2020 | 34 | 2020 |
| Predicting gene expression in massively parallel reporter assays: A comparative study A Kreimer, H Zeng, MD Edwards, Y Guo, K Tian, S Shin, R Welch, ... Human mutation 38 (9), 1240-1250, 2017 | 27 | 2017 |
| Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements J Tycko, M Wainberg, GK Marinov, O Ursu, GT Hess, BK Ego, A Li, ... Nature communications 10 (1), 1-14, 2019 | 21 | 2019 |
| High-throughput characterization of Cascade type IE CRISPR guide efficacy reveals unexpected PAM diversity and target sequence preferences BXH Fu, M Wainberg, A Kundaje, AZ Fire Genetics 206 (4), 1727-1738, 2017 | 16 | 2017 |
| Does conservation account for splicing patterns? M Wainberg, B Alipanahi, B Frey BMC genomics 17 (1), 787, 2016 | 15 | 2016 |
| Homogeneity in the association of body mass index with type 2 diabetes across the UK Biobank: A Mendelian randomization study M Wainberg, A Mahajan, A Kundaje, MI McCarthy, E Ingelsson, ... PLoS medicine 16 (12), e1002982, 2019 | 10 | 2019 |
| A genome-wide almanac of co-essential modules assigns function to uncharacterized genes M Wainberg, RA Kamber, A Balsubramani, RM Meyers, ... bioRxiv, 827071, 2019 | 9 | 2019 |
| Neuronally Enriched RUFY3 Is Required for Caspase-Mediated Axon Degeneration NT Hertz, EL Adams, RA Weber, RJ Shen, MK O’Rourke, DJ Simon, ... Neuron 103 (3), 412-422. e4, 2019 | 4 | 2019 |
| Rare protein-altering variants in ANGPTL7 lower intraocular pressure and protect against glaucoma Y Tanigawa, M Wainberg, J Karjalainen, T Kiiskinen, G Venkataraman, ... PLoS genetics 16 (5), e1008682, 2020 | 1 | 2020 |
| Multiomic blood correlates of genetic risk identify presymptomatic disease alterations M Wainberg, AT Magis, JC Earls, JC Lovejoy, N Sinnott-Armstrong, ... Proceedings of the National Academy of Sciences 117 (35), 21813-21820, 2020 | | 2020 |
