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Kedar Nath Natarajan
Kedar Nath Natarajan
Wellcome Trust Sanger Institute, European Bioinformatics Institute
Verified email at sanger.ac.uk
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Cited by
Year
SC3: consensus clustering of single-cell RNA-seq data
VY Kiselev, K Kirschner, MT Schaub, T Andrews, A Yiu, T Chandra, ...
Nature methods 14 (5), 483-486, 2017
14002017
Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ...
Nature biotechnology 33 (2), 155-160, 2015
12772015
Power analysis of single-cell RNA-sequencing experiments
V Svensson, KN Natarajan, LH Ly, RJ Miragaia, C Labalette, IC Macaulay, ...
Nature methods 14 (4), 381-387, 2017
6242017
Single cell RNA-sequencing of pluripotent states unlocks modular transcriptional variation
AA Kolodziejczyk, JK Kim, JCH Tsang, T Ilicic, J Henriksson, ...
Cell stem cell 17 (4), 471-485, 2015
5832015
Computational assignment of cell-cycle stage from single-cell transcriptome data
A Scialdone, KN Natarajan, LR Saraiva, V Proserpio, SA Teichmann, ...
Methods 85, 54-61, 2015
3892015
BioModels: ten-year anniversary
V Chelliah, N Juty, I Ajmera, R Ali, M Dumousseau, M Glont, M Hucka, ...
Nucleic acids research 43 (D1), D542-D548, 2015
3222015
Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression
ASE Cuomo, DD Seaton, DJ McCarthy, I Martinez, MJ Bonder, ...
Nature communications 11 (1), 810, 2020
2612020
The Malaria Cell Atlas: Single parasite transcriptomes across the complete Plasmodium life cycle
VM Howick, AJC Russell, T Andrews, H Heaton, AJ Reid, K Natarajan, ...
Science 365 (6455), eaaw2619, 2019
2372019
SBML Level 3: an extensible format for the exchange and reuse of biological models
SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ...
Molecular systems biology 16 (8), e9110, 2020
2342020
A rapid and robust method for single cell chromatin accessibility profiling
X Chen, RJ Miragaia, KN Natarajan, SA Teichmann
Nature communications 9 (1), 5345, 2018
2032018
Comparative analysis of sequencing technologies for single-cell transcriptomics
KN Natarajan, Z Miao, M Jiang, X Huang, H Zhou, J Xie, C Wang, S Qin, ...
Genome Biology 20, 1-8, 2019
1112019
Transcriptional dynamics of hepatic sinusoid‐associated cells after liver injury
MK Terkelsen, SM Bendixen, D Hansen, EAH Scott, AF Moeller, ...
Hepatology 72 (6), 2119-2133, 2020
862020
Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation
J Pramanik, X Chen, G Kar, J Henriksson, T Gomes, JE Park, K Natarajan, ...
Genome medicine 10, 1-19, 2018
832018
Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression
G Kar, JK Kim, AA Kolodziejczyk, KN Natarajan, E Torlai Triglia, B Mifsud, ...
Nature communications 8 (1), 36, 2017
822017
Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition
M Oatley, ÖV Bölükbası, V Svensson, M Shvartsman, K Ganter, K Zirngibl, ...
Nature communications 11 (1), 586, 2020
812020
Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation
V Proserpio, A Piccolo, L Haim-Vilmovsky, G Kar, T Lönnberg, ...
Genome biology 17, 1-15, 2016
692016
Distinctive features of lincRNA gene expression suggest widespread RNA-independent functions
AC Tuck, KN Natarajan, GM Rice, J Borawski, F Mohn, A Rankova, ...
Life science alliance 1 (4), 2018
412018
TENET: gene network reconstruction using transfer entropy reveals key regulatory factors from single cell transcriptomic data
J Kim, S T. Jakobsen, KN Natarajan, KJ Won
Nucleic acids research 49 (1), e1-e1, 2021
362021
Single-cell tagged reverse transcription (STRT-Seq)
KN Natarajan
Single Cell Methods: Sequencing and Proteomics, 133-153, 2019
362019
Exploration of cell state heterogeneity using single-cell proteomics through sensitivity-tailored data-independent acquisition
V Petrosius, P Aragon-Fernandez, N Üresin, G Kovacs, T Phlairaharn, ...
Nature Communications 14 (1), 5910, 2023
352023
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