Yu Lin
Yu Lin
Research School of Computer Science, Australian National University
Verified email at anu.edu.au - Homepage
Title
Cited by
Cited by
Year
Assembly of long, error-prone reads using repeat graphs
M Kolmogorov, J Yuan, Y Lin, PA Pevzner
Nature biotechnology 37 (5), 540-546, 2019
1912019
Assembly of long error-prone reads using de Bruijn graphs
Y Lin, J Yuan, M Kolmogorov, MW Shen, M Chaisson, PA Pevzner
Proceedings of the National Academy of Sciences 113 (52), E8396-E8405, 2016
832016
A metric for phylogenetic trees based on matching
Y Lin, V Rajan, BME Moret
IEEE/ACM Transactions on Computational Biology and Bioinformatics 9 (4 …, 2011
722011
MLGO: phylogeny reconstruction and ancestral inference from gene-order data
F Hu, Y Lin, J Tang
BMC bioinformatics 15 (1), 354, 2014
572014
Estimating true evolutionary distances under the DCJ model
Y Lin, BME Moret
Bioinformatics 24 (13), i114-i122, 2008
572008
Maximum likelihood phylogenetic reconstruction from high-resolution whole-genome data and a tree of 68 eukaryotes
Y Lin, F Hu, J Tang, BME Moret
The Pacific Symposium on Biocomputing 2013, 285-296, 2013
422013
Approximating the edit distance for genomes with duplicate genes under DCJ, insertion and deletion
M Shao, Y Lin
BMC bioinformatics 13 (S19), S13, 2012
392012
An exact algorithm to compute the double-cut-and-join distance for genomes with duplicate genes
M Shao, Y Lin, BME Moret
Journal of Computational Biology 22 (5), 425-435, 2015
282015
Heuristics for the inversion median problem
V Rajan, AW Xu, Y Lin, KM Swenson, BME Moret
BMC bioinformatics 11 (1), 1-11, 2010
282010
Fast and accurate phylogenetic reconstruction from high-resolution whole-genome data and a novel robustness estimator
Y Lin, V Rajan, BME Moret
Journal of Computational Biology 18 (9), 1131-1139, 2011
262011
Sorting Signed Permutations by Inversions in O(nlogn) Time
KM Swenson, V Rajan, Y Lin, BME Moret
Annual International Conference on Research in Computational Molecular …, 2009
252009
Hurdles hardly have to be heeded
KM Swenson, Y Lin, V Rajan, BME Moret
RECOMB International Workshop on Comparative Genomics, 241-251, 2008
252008
Estimating true evolutionary distances under rearrangements, duplications, and losses
Y Lin, V Rajan, KM Swenson, BME Moret
BMC bioinformatics 11 (S1), S54, 2010
242010
An exact algorithm to compute the DCJ distance for genomes with duplicate genes
M Shao, Y Lin, B Moret
International Conference on Research in Computational Molecular Biology, 280-292, 2014
232014
What is the difference between the breakpoint graph and the de Bruijn graph?
Y Lin, S Nurk, PA Pevzner
BMC genomics 15 (S6), S6, 2014
192014
Direct MALDI-TOF MS identification of bacterial mixtures
Y Yang, Y Lin, L Qiao
Analytical chemistry 90 (17), 10400-10408, 2018
182018
Bootstrapping phylogenies inferred from rearrangement data
Y Lin, V Rajan, BME Moret
Algorithms for Molecular Biology 7 (1), 1-10, 2012
172012
Sorting signed permutations by inversions in O (n log n) time
KM Swenson, V Rajan, Y Lin, BME Moret
Journal of Computational Biology 17 (3), 489-501, 2010
172010
Sorting genomes with rearrangements and segmental duplications through trajectory graphs
M Shao, Y Lin, B Moret
BMC bioinformatics 14 (S15), S9, 2013
132013
Rearrangements in phylogenetic inference: Compare, model, or encode?
BME Moret, Y Lin, J Tang
Models and algorithms for genome evolution, 147-171, 2013
132013
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