|Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling|
AA Alizadeh, MB Eisen, RE Davis, C Ma, IS Lossos, A Rosenwald, ...
Nature 403 (6769), 503-511, 2000
|Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation.|
R Radha, S Jayalakshmi, SP Rajagopalan, AA Alizadeh, MB Eisen, ...
Information Technology Journal 7 (1), 503-511, 2000
|Genome-wide anaIysis of DNA copy-number changes using cDNA microarrays|
JR Pollack, CM Perou, AA Alizadeh, MB Eisen, A Pergamenschikov, ...
Nature genetics 23, 1999
|Robust enumeration of cell subsets from tissue expression profiles|
AM Newman, CL Liu, MR Green, AJ Gentles, W Feng, Y Xu, CD Hoang, ...
Nature methods 12 (5), 453-457, 2015
|An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage|
AM Newman, SV Bratman, J To, JF Wynne, NCW Eclov, LA Modlin, ...
Nature medicine 20 (5), 548-554, 2014
|Relation of gene expression phenotype to immunoglobulin mutation genotype in B cell chronic lymphocytic leukemia|
A Rosenwald, AA Alizadeh, G Widhopf, R Simon, RE Davis, X Yu, L Yang, ...
The Journal of experimental medicine 194 (11), 1639-1648, 2001
|The prognostic landscape of genes and infiltrating immune cells across human cancers|
AJ Gentles, AM Newman, CL Liu, SV Bratman, W Feng, D Kim, VS Nair, ...
Nature medicine 21 (8), 938-945, 2015
|CD47 is an adverse prognostic factor and therapeutic antibody target on human acute myeloid leukemia stem cells|
R Majeti, MP Chao, AA Alizadeh, WW Pang, S Jaiswal, KD Gibbs, ...
Cell 138 (2), 286-299, 2009
|Gene expression signature of fibroblast serum response predicts human cancer progression: similarities between tumors and wounds|
HY Chang, JB Sneddon, AA Alizadeh, R Sood, RB West, K Montgomery, ...
PLoS Biol 2 (2), e7, 2004
|Prediction of survival in diffuse large-B-cell lymphoma based on the expression of six genes|
IS Lossos, DK Czerwinski, AA Alizadeh, MA Wechser, R Tibshirani, ...
New England Journal of Medicine 350 (18), 1828-1837, 2004
|Individuality and variation in gene expression patterns in human blood|
AR Whitney, M Diehn, SJ Popper, AA Alizadeh, JC Boldrick, DA Relman, ...
Proceedings of the National Academy of Sciences 100 (4), 1896, 2003
|The CD47-signal regulatory protein alpha (SIRPa) interaction is a therapeutic target for human solid tumors|
SB Willingham, JP Volkmer, AJ Gentles, D Sahoo, P Dalerba, SS Mitra, ...
Proceedings of the National Academy of Sciences 109 (17), 6662-6667, 2012
|'Gene shaving'as a method for identifying distinct sets of genes with similar expression patterns|
T Hastie, R Tibshirani, MB Eisen, A Alizadeh, R Levy, L Staudt, WC Chan, ...
Genome biology 1 (2), research0003. 1, 2000
|Anti-CD47 antibody synergizes with rituximab to promote phagocytosis and eradicate non-Hodgkin lymphoma|
MP Chao, AA Alizadeh, C Tang, JH Myklebust, B Varghese, S Gill, M Jan, ...
Cell 142 (5), 699-713, 2010
|SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data|
M Diehn, G Sherlock, G Binkley, H Jin, JC Matese, ...
Nucleic acids research 31 (1), 219-223, 2003
|Integrated digital error suppression for improved detection of circulating tumor DNA|
AM Newman, AF Lovejoy, DM Klass, DM Kurtz, JJ Chabon, F Scherer, ...
Nature biotechnology 34 (5), 547-555, 2016
|Stereotyped and specific gene expression programs in human innate immune responses to bacteria|
JC Boldrick, AA Alizadeh, M Diehn, S Dudoit, CL Liu, CE Belcher, ...
Proceedings of the National Academy of Sciences 99 (2), 972, 2002
|Calreticulin is the dominant pro-phagocytic signal on multiple human cancers and is counterbalanced by CD47|
MP Chao, S Jaiswal, R Weissman-Tsukamoto, AA Alizadeh, AJ Gentles, ...
Science translational medicine 2 (63), 63ra94-63ra94, 2010
|Toward understanding and exploiting tumor heterogeneity|
AA Alizadeh, V Aranda, A Bardelli, C Blanpain, C Bock, C Borowski, ...
Nature medicine 21 (8), 846, 2015
|Genomic expression programs and the integration of the CD28 costimulatory signal in T cell activation|
M Diehn, AA Alizadeh, OJ Rando, CL Liu, K Stankunas, D Botstein, ...
Proceedings of the National Academy of Sciences 99 (18), 11796-11801, 2002