Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... GigaScience 2 (1), 2047-217X-2-10, 2013 | 815 | 2013 |
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... GigaScience 2 (1), 2047-217X-2-10, 2013 | 815 | 2013 |
Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011 | 638 | 2011 |
Concurrent CIC mutations, IDH mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers S Yip, YS Butterfield, O Morozova, S Chittaranjan, MD Blough, J An, I Birol, ... The Journal of pathology 226 (1), 7-16, 2012 | 350 | 2012 |
Draft genome of the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major forest pest CI Keeling, MMS Yuen, NY Liao, TR Docking, SK Chan, GA Taylor, ... Genome biology 14 (3), 1-20, 2013 | 314 | 2013 |
Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen S DiGuistini, Y Wang, NY Liao, G Taylor, P Tanguay, N Feau, B Henrissat, ... Proceedings of the National Academy of Sciences 108 (6), 2504-2509, 2011 | 256 | 2011 |
De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data S DiGuistini, NY Liao, D Platt, G Robertson, M Seidel, SK Chan, ... Genome biology 10 (9), 1-12, 2009 | 214 | 2009 |
Transcriptome and full-length cDNA resources for the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major insect pest of pine forests CI Keeling, H Henderson, M Li, M Yuen, EL Clark, JD Fraser, DPW Huber, ... Insect biochemistry and molecular biology 42 (8), 525-536, 2012 | 117 | 2012 |
A regulatory toolbox of MiniPromoters to drive selective expression in the brain E Portales-Casamar, DJ Swanson, L Liu, CN de Leeuw, KG Banks, ... Proceedings of the National Academy of Sciences 107 (38), 16589-16594, 2010 | 97 | 2010 |
Applications of Bayesian network models in predicting types of hematological malignancies R Agrahari, A Foroushani, TR Docking, L Chang, G Duns, M Hudoba, ... Scientific reports 8 (1), 1-12, 2018 | 87 | 2018 |
A clinical transcriptome approach to patient stratification and therapy selection in acute myeloid leukemia TR Docking, JDK Parker, M Jädersten, G Duns, L Chang, J Jiang, ... Nature Communications 12 (1), 1-15, 2021 | 82 | 2021 |
The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera S Haridas, Y Wang, L Lim, SM Alamouti, S Jackman, R Docking, ... BMC genomics 14 (1), 1-15, 2013 | 78 | 2013 |
Transcriptome resources and functional characterization of monoterpene synthases for two host species of the mountain pine beetle, lodgepole pine (Pinus contorta) and jack pine … DE Hall, MMS Yuen, S Jancsik, AL Quesada, HK Dullat, M Li, ... BMC plant biology 13 (1), 1-14, 2013 | 76 | 2013 |
Large-scale gene network analysis reveals the significance of extracellular matrix pathway and homeobox genes in acute myeloid leukemia: an introduction to the Pigengene … A Foroushani, R Agrahari, R Docking, L Chang, G Duns, M Hudoba, ... BMC medical genomics 10 (1), 1-15, 2017 | 57 | 2017 |
Altered microRNA expression links IL6 and TNF-induced inflammaging with myeloid malignancy JM Grants, J Wegrzyn-Woltosz, T Hui, K O'Neill, M Shadbolt, DJHF Knapp, ... Blood Journal, blood. 2019003105, 2020 | 52 | 2020 |
Updated genome assembly and annotation of Paenibacillus larvae, the agent of American foulbrood disease of honey bees QWT Chan, RS Cornman, I Birol, NY Liao, SK Chan, TR Docking, ... BMC genomics 12 (1), 1-16, 2011 | 48 | 2011 |
Loss of lenalidomide-induced megakaryocytic differentiation leads to therapy resistance in del (5q) myelodysplastic syndrome S Martinez-Høyer, Y Deng, J Parker, J Jiang, A Mo, TR Docking, ... Nature Cell Biology 22 (5), 526-533, 2020 | 39 | 2020 |
A clinically validated diagnostic second-generation sequencing assay for detection of hereditary BRCA1 and BRCA2 mutations IE Bosdet, TR Docking, YS Butterfield, AJ Mungall, T Zeng, RJ Coope, ... The Journal of Molecular Diagnostics 15 (6), 796-809, 2013 | 39 | 2013 |
Gene discovery for the bark beetle-vectored fungal tree pathogen Grosmannia clavigera U Hesse-Orce, S DiGuistini, CI Keeling, Y Wang, M Li, H Henderson, ... BMC genomics 11 (1), 1-11, 2010 | 32 | 2010 |
Kleat: cleavage site analysis of transcriptomes I Birol, A Raymond, R Chiu, KM Nip, SD Jackman, M Kreitzman, ... Pacific Symposium on Biocomputing Co-Chairs, 347-358, 2014 | 29 | 2014 |