Byung-Jun Yoon

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Xiaoning QianTexas A&M UniversityVerified email at ece.tamu.edu
Edward DoughertyProfessor of Electrical and Computer Engineering, Texas A&M UniversityVerified email at ece.tamu.edu
Palghat VaidyanathanKiyo and Eiko Tomiyasu Professor, California Institute of TechnologyVerified email at systems.caltech.edu
Sayed Mohammad Ebrahim SahraeianBioinformatics Scientist, Roche Sequencing SolutionsVerified email at roche.com
Francis AlexanderArgonne National LaboratoryVerified email at anl.gov
Hyundoo JeongIncheon National UniversityVerified email at inu.ac.kr
Hyun-Myung WooAssistant Professor at Incheon National UniversityVerified email at inu.ac.kr
Huaijun Zhou, Professor, Chancellor F...University of California, DavisVerified email at ucdavis.edu
Alex AceroAppleVerified email at apple.com
Ivan TashevMicrosoft ResearchVerified email at microsoft.com
Roozbeh DehghannasiriInstructor, Stanford UniversityVerified email at stanford.edu
Guang ZhaoTexas A&M UniversityVerified email at tamu.edu
Navadon KhunlertgitDepartment of Computer Engineering, Chiang Mai University, THAILANDVerified email at cmu.ac.th
Mohammad Shahrokh EsfahaniStanford UniversityVerified email at stanford.edu
Won Bo ShimPlant Pathology & Microbiology, Texas A&M UniversityVerified email at tamu.edu
Henrique MalvarMicrosoft Emeritus ResearcherVerified email at alum.mit.edu
Chun-Chi ChenNCYUVerified email at mail.ncyu.edu.tw
Sungcheol HongTexas A&MVerified email at tamu.edu
Noushin GhaffariPrairie View A&M UniversityVerified email at pvamu.edu
Sing-Hoi SzeDepartment of Computer Science and Engineering, Texas A&M UniversityVerified email at cs.tamu.edu

Byung-Jun Yoon

Texas A&M University

Verified email at ece.tamu.edu - Homepage

Optimal Experimental Design AI for Science Bioinformatics Computational Network Biology


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Hidden Markov models and their applications in biological sequence analysis BJ Yoon Current Genomics 10 (6), 402-415, 2009	469	2009
The role of signal-processing concepts in genomics and proteomics PP Vaidyanathan, BJ Yoon Journal of the Franklin Institute 341 (1-2), 111-135, 2004	234	2004
Accurate and reliable cancer classification based on probabilistic inference of pathway activity J Su, BJ Yoon, ER Dougherty PLOS ONE 4 (12), e8161, 2009	148	2009
Digital filters for gene prediction applications PP Vaidyanathan, BJ Yoon Asilomar Conference on Signals, Systems, and Computers 1, 306-310, 2002	133	2002
Wavelet-based denoising by customized thresholding BJ Yoon, PP Vaidyanathan 2004 IEEE International Conference on Acoustics, Speech, and Signal …, 2004	131	2004
Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach Y Wang, V Brahmakshatriya, H Zhu, B Lupiani, SM Reddy, BJ Yoon, ... BMC Genomics 10 (1), 1-20, 2009	128	2009
SMETANA: accurate and scalable algorithm for probabilistic alignment of large-scale biological networks SME Sahraeian, BJ Yoon PLOS ONE 8 (7), e67995, 2013	119	2013
Robust adaptive beamforming with enhanced noise suppression I Tashev, A Acero, BJ Yoon US Patent 8,005,238, 2011	115	2011
Gene and exon prediction using allpass-based filters PP Vaidyanathan, BJ Yoon Workshop on Genomic Sig. Proc. And Stat., Raleigh, NC, 2002	107	2002
Identification of diagnostic subnetwork markers for cancer in human protein-protein interaction network J Su, BJ Yoon, ER Dougherty BMC Bioinformatics 11 (6), 1-13, 2010	82	2010
Quantifying the objective cost of uncertainty in complex dynamical systems BJ Yoon, X Qian, ER Dougherty IEEE Transactions on Signal Processing 61 (9), 2256-2266, 2013	76	2013
A network synthesis model for generating protein interaction network families SME Sahraeian, BJ Yoon PLOS ONE 7 (8), e41474, 2012	62	2012
Optimal experimental design for gene regulatory networks in the presence of uncertainty R Dehghannasiri, BJ Yoon, ER Dougherty IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (4 …, 2014	61	2014
PicXAA: greedy probabilistic construction of maximum expected accuracy alignment of multiple sequences SME Sahraeian, BJ Yoon Nucleic Acids Research 38 (15), 4917-4928, 2010	54	2010
A novel low-complexity HMM similarity measure SME Sahraeian, BJ Yoon IEEE Signal Processing Letters 18 (2), 87-90, 2010	47	2010
Querying pathways in protein interaction networks based on hidden Markov models X Qian, SH Sze, BJ Yoon Journal of Computational Biology 16 (2), 145-157, 2009	38	2009
Enhanced stochastic optimization algorithm for finding effective multi-target therapeutics BJ Yoon BMC Bioinformatics 12 (1), 1-11, 2011	36	2011
Efficient experimental design for uncertainty reduction in gene regulatory networks R Dehghannasiri, BJ Yoon, ER Dougherty BMC Bioinformatics 16 (13), 1-18, 2015	35	2015
Comparative analysis of biological networks: Hidden markov model and markov chain-based approach BJ Yoon, X Qian, SME Sahraeian IEEE Signal Processing Magazine 29 (1), 22-34, 2011	34	2011
Effective identification of conserved pathways in biological networks using hidden Markov models X Qian, BJ Yoon PLOS ONE 4 (12), e8070, 2009	33	2009

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