Byung-Jun Yoon
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Hidden Markov models and their applications in biological sequence analysis
BJ Yoon
Current Genomics 10 (6), 402-415, 2009
The role of signal-processing concepts in genomics and proteomics
PP Vaidyanathan, BJ Yoon
Journal of the Franklin Institute 341 (1-2), 111-135, 2004
Accurate and reliable cancer classification based on probabilistic inference of pathway activity
J Su, BJ Yoon, ER Dougherty
PLOS ONE 4 (12), e8161, 2009
Digital filters for gene prediction applications
PP Vaidyanathan, BJ Yoon
Asilomar Conference on Signals, Systems, and Computers 1, 306-310, 2002
Wavelet-based denoising by customized thresholding
BJ Yoon, PP Vaidyanathan
2004 IEEE International Conference on Acoustics, Speech, and Signal …, 2004
Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach
Y Wang, V Brahmakshatriya, H Zhu, B Lupiani, SM Reddy, BJ Yoon, ...
BMC Genomics 10 (1), 1-20, 2009
SMETANA: accurate and scalable algorithm for probabilistic alignment of large-scale biological networks
SME Sahraeian, BJ Yoon
PLOS ONE 8 (7), e67995, 2013
Robust adaptive beamforming with enhanced noise suppression
I Tashev, A Acero, BJ Yoon
US Patent 8,005,238, 2011
Gene and exon prediction using allpass-based filters
PP Vaidyanathan, BJ Yoon
Workshop on Genomic Sig. Proc. And Stat., Raleigh, NC, 2002
Identification of diagnostic subnetwork markers for cancer in human protein-protein interaction network
J Su, BJ Yoon, ER Dougherty
BMC Bioinformatics 11 (6), 1-13, 2010
Quantifying the objective cost of uncertainty in complex dynamical systems
BJ Yoon, X Qian, ER Dougherty
IEEE Transactions on Signal Processing 61 (9), 2256-2266, 2013
A network synthesis model for generating protein interaction network families
SME Sahraeian, BJ Yoon
PLOS ONE 7 (8), e41474, 2012
Optimal experimental design for gene regulatory networks in the presence of uncertainty
R Dehghannasiri, BJ Yoon, ER Dougherty
IEEE/ACM Transactions on Computational Biology and Bioinformatics 12 (4 …, 2014
PicXAA: greedy probabilistic construction of maximum expected accuracy alignment of multiple sequences
SME Sahraeian, BJ Yoon
Nucleic Acids Research 38 (15), 4917-4928, 2010
A novel low-complexity HMM similarity measure
SME Sahraeian, BJ Yoon
IEEE Signal Processing Letters 18 (2), 87-90, 2010
Querying pathways in protein interaction networks based on hidden Markov models
X Qian, SH Sze, BJ Yoon
Journal of Computational Biology 16 (2), 145-157, 2009
Enhanced stochastic optimization algorithm for finding effective multi-target therapeutics
BJ Yoon
BMC Bioinformatics 12 (1), 1-11, 2011
Efficient experimental design for uncertainty reduction in gene regulatory networks
R Dehghannasiri, BJ Yoon, ER Dougherty
BMC Bioinformatics 16 (13), 1-18, 2015
Comparative analysis of biological networks: Hidden markov model and markov chain-based approach
BJ Yoon, X Qian, SME Sahraeian
IEEE Signal Processing Magazine 29 (1), 22-34, 2011
Effective identification of conserved pathways in biological networks using hidden Markov models
X Qian, BJ Yoon
PLOS ONE 4 (12), e8070, 2009
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