Pralay Mitra
Pralay Mitra
Associate Professor, Computer Science & Engineering, Indian Institute of Technology, Kharagpur
Verified email at cse.iitkgp.ac.in - Homepage
Title
Cited by
Cited by
Year
An Evolution-Based Approach to De Novo Protein Design and Case Study on Mycobacterium tuberculosis
P Mitra, D Shultis, JR Brender, J Czajka, D Marsh, F Gray, T Cierpicki, ...
PLoS computational biology 9 (10), e1003298, 2013
402013
EvoDesign: de novo protein design based on structural and evolutionary profiles
P Mitra, D Shultis, Y Zhang
Nucleic acids research 41 (W1), W273-W280, 2013
402013
How many protein-protein interactions types exist in nature?
L Garma, S Mukherjee, P Mitra, Y Zhang
PLoS One 7 (6), e38913, 2012
352012
Combining Bayes classification and point group symmetry under Boolean framework for enhanced protein quaternary structure inference
P Mitra, D Pal
Structure 19 (3), 304-312, 2011
242011
New measures for estimating surface complementarity and packing at protein–protein interfaces
P Mitra, D Pal
FEBS letters 584 (6), 1163-1168, 2010
212010
Delineation of crosstalk between HSP27 and MMP-2/MMP-9: A synergistic therapeutic avenue for glioblastoma management
Y Rajesh, A Banerjee, I Pal, A Biswas, S Das, KK Dey, N Kapoor, ...
Biochimica et Biophysica Acta (BBA)-General Subjects 1863 (7), 1196-1209, 2019
162019
Using correlated parameters for improved ranking of protein–protein docking decoys
P Mitra, D Pal
Journal of computational chemistry 32 (5), 787-796, 2011
132011
PRUNE and PROBE—two modular web services for protein–protein docking
P Mitra, D Pal
Nucleic acids research 39 (suppl_2), W229-W234, 2011
122011
Changing the apoptosis pathway through evolutionary protein design
D Shultis, P Mitra, X Huang, J Johnson, NA Khattak, F Gray, C Piper, ...
Journal of molecular biology 431 (4), 825-841, 2019
112019
A graph theoretic approach to minimize total wire length in channel routing
P Mitra, N Ghoshal, RK Pal
TENCON 2003. Conference on Convergent Technologies for Asia-Pacific Region 1 …, 2003
92003
Boosting phosphorylation site prediction with sequence feature‐based machine learning
S Maiti, A Hassan, P Mitra
Proteins: Structure, Function, and Bioinformatics 88 (2), 284-291, 2020
62020
A network-based zoning for parallel whole-cell simulation
B Das, AR Patil, P Mitra
Bioinformatics 35 (1), 88-94, 2019
52019
Integrin β1 regulates doxorubicin resistance in breast cancer via FAK-mediated activation of ERK1 pathway
S Das, BC Jena, S Mundre, A Parekh, Y Rajesh, P Mitra, M Mandal
Cancer Research 78 (13 Supplement), 4022-4022, 2018
52018
ETV6 gene aberrations in non-haematological malignancies: A review highlighting ETV6 associated fusion genes in solid tumors
A Biswas, Y Rajesh, P Mitra, M Mandal
Biochimica et Biophysica Acta (BBA)-Reviews on Cancer, 188389, 2020
42020
Ebolavirus interferon antagonists—protein interaction perspectives to combat pathogenesis
A Banerjee, A Pal, D Pal, P Mitra
Briefings in functional genomics 17 (6), 392-401, 2018
42018
Estimating the effect of single-point mutations on protein thermodynamic stability and analyzing the mutation landscape of the p53 protein
A Banerjee, P Mitra
Journal of chemical information and modeling 60 (6), 3315-3323, 2020
32020
Analyzing Change in Protein Stability Associated with Single Point Deletions in a Newly Defined Protein Structure Database
A Banerjee, Y Levy, P Mitra
Journal of proteome research 18 (3), 1402-1410, 2019
32019
An evolutionary profile guided greedy parallel replica-exchange Monte Carlo search algorithm for rapid convergence in protein design
A Banerjee, K Pal, P Mitra
IEEE/ACM transactions on computational biology and bioinformatics, 2019
22019
Bacterial flagellar switching: a molecular mechanism directed by the logic of an electric motor
S Maiti, P Mitra
Journal of molecular modeling 24 (10), 1-10, 2018
22018
High-Performance Whole-Cell Simulation Exploiting Modular Cell Biology Principles
B Das, P Mitra
Journal of Chemical Information and Modeling 61 (3), 1481-1492, 2021
12021
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Articles 1–20