Jeremy Bird
Jeremy Bird
Assistant Professor of Biological Sciences, University of Delaware
Verified email at udel.edu
Title
Cited by
Cited by
Year
Interactions between RNA polymerase and the “core recognition element” counteract pausing
IO Vvedenskaya, H Vahedian-Movahed, JG Bird, JG Knoblauch, ...
Science 344 (6189), 1285-1289, 2014
1282014
The mechanism of RNA 5′ capping with NAD+, NADH and desphospho-CoA
JG Bird, Y Zhang, Y Tian, N Panova, I Barvík, L Greene, M Liu, B Buckley, ...
Nature 535 (7612), 444-447, 2016
1212016
5′ end nicotinamide adenine dinucleotide cap in human cells promotes RNA decay through DXO-mediated deNADding
X Jiao, SK Doamekpor, JG Bird, BE Nickels, L Tong, RP Hart, M Kiledjian
Cell 168 (6), 1015-1027. e10, 2017
1122017
Multiplexed protein-DNA cross-linking: Scrunching in transcription start site selection
JT Winkelman, IO Vvedenskaya, Y Zhang, Y Zhang, JG Bird, DM Taylor, ...
Science 351 (6277), 1090-1093, 2016
452016
CapZyme-Seq Comprehensively Defines Promoter-Sequence Determinants for RNA 5′ Capping with NAD+
IO Vvedenskaya, JG Bird, Y Zhang, Y Zhang, X Jiao, I Barvík, L Krásný, ...
Molecular cell 70 (3), 553-564. e9, 2018
422018
Plasmid P1 RepA is homologous to the F plasmid RepE class of initiators
S Sharma, BK Sathyanarayana, JG Bird, JR Hoskins, B Lee, S Wickner
Journal of Biological Chemistry 279 (7), 6027-6034, 2004
382004
Highly efficient 5'capping of mitochondrial RNA with NAD+ and NADH by yeast and human mitochondrial RNA polymerase
JG Bird, U Basu, D Kuster, A Ramachandran, E Grudzien-Nogalska, ...
Elife 7, e42179, 2018
322018
Functional analysis of CbpA, a DnaJ homolog and nucleoid-associated DNA-binding protein
JG Bird, S Sharma, SC Roshwalb, JR Hoskins, S Wickner
Journal of Biological Chemistry 281 (45), 34349-34356, 2006
322006
“NAD-capQ” detection and quantitation of NAD caps
E Grudzien-Nogalska, JG Bird, BE Nickels, M Kiledjian
RNA 24 (10), 1418-1425, 2018
192018
A universal transcription pause sequence is an element of initiation factor σ70-dependent pausing
JG Bird, EJ Strobel, JW Roberts
Nucleic acids research 44 (14), 6732-6740, 2016
72016
RNA Capping by Transcription Initiation with Non-canonical Initiating Nucleotides (NCINs): Determination of Relative Efficiencies of Transcription Initiation with NCINs and NTPs
JG Bird, BE Nickels, RH Ebright
Bio-protocol 7 (12), 2017
52017
The lysis cassette of DLP12 defective prophage is regulated by RpoE
KG Rueggeberg, FA Toba, JG Bird, N Franck, MG Thompson, AG Hay
Microbiology 161 (8), 1683-1693, 2015
32015
Characterization of novel DNA elements necessary for sigma-dependent promoter proximal transcriptional pausing
J Bird
22013
Mitochondrial RNA capping: highly efficient 5'-RNA capping with NAD+ and NADH by yeast and human mitochondrial RNA polymerase
JG Bird, U Basu, D Kuster, A Ramachandran, E Grudzien-Nogalska, ...
bioRxiv, 381160, 2018
12018
The Mechanism of Transcription Stalling under Torsion
C Tan, J Ma, JG Bird, JT Inman, JW Roberts, MD Wang
Biophysical Journal 108 (2), 536a, 2015
12015
Sequence-Specific RNAP-DNA Interactions in Transcription Initiation and Elongation: Core Recognition Element (CRE)
H Vahedian-Movahed, Y Zhang, J Bird, I Vvedenskaya, J Knobloch, ...
Biophysical Journal 108 (2), 535a, 2015
2015
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