Yong Wang

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Luonan ChenProfessor of Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of SciencesVerified email at sibs.ac.cn
Xiang-Sun ZhangAcademy of Mathematics and Systems Science, Chinese Academy of Sciences Verified email at amt.ac.cn
Ling-Yun WuProfessor of Academy of Mathematics and Systems Science, Chinese Academy of SciencesVerified email at amss.ac.cn
Zhi-Ping LiuProfessor of Biomedical Informatics, Shandong UniversityVerified email at sdu.edu.cn
Wing Hung WongStanford UniversityVerified email at stanford.edu
Zhana DurenAssistant Professor, Center for Human Genetics, Clemson UniversityVerified email at clemson.edu
Jiguang WangHong Kong University of Science and TechnologyVerified email at ust.hk
Shihua ZhangProfessor of Academy of Mathematics and Systems Science, Chinese Academy of SciencesVerified email at amss.ac.cn
Rui JiangTsinghua UniversityVerified email at tsinghua.edu.cn
Rui-Sheng WangAssistant Professor, Brigham and Women's Hospital, Harvard Medical SchoolVerified email at bwh.harvard.edu
Xianwen RenChangping LaboratoryVerified email at pku.edu.cn
Dong XuCurators’ Distinguished Professor, University of MissouriVerified email at missouri.edu
Trupti JoshiUniversity of Missouri, Department of Health Management and InformaticsVerified email at missouri.edu
Meng ZouAcademic of mathematics and systems scienceVerified email at amss.ac.cn
Wanwen ZengStanford UniveristyVerified email at stanford.edu
Qiang Huang AMSSPh.D., Academy of Mathematics & Systems Science, Chinese Academy of SciencesVerified email at mails.gucas.ac.cn
Xing-Ming ZhaoFudan UniversityVerified email at fudan.edu.cn
Howard Y. ChangStanford UniversityVerified email at stanford.edu
Xuefeng Bruce Ling, Ph.D.Professor of Surgery, Stanford UniversityVerified email at stanford.edu
Yu (Brandon) XiaProfessor of Bioengineering, McGill UniversityVerified email at mcgill.ca

Yong Wang

Academy of Mathematics and Systems Science, Chinese Academy of Sciences

Verified email at amss.ac.cn - Homepage

Optimization Bioinformatics Systems biology Complex network Computational Biology


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A community effort to assess and improve drug sensitivity prediction algorithms JC Costello, LM Heiser, E Georgii, M Gönen, MP Menden, NJ Wang, ... Nature biotechnology 32 (12), 1202, 2014	623	2014
Inferring gene regulatory networks from multiple microarray datasets Y Wang, T Joshi, XS Zhang, D Xu, L Chen Bioinformatics 22 (19), 2413-2420, 2006	355	2006
Reverse Engineering Y Wang Encyclopedia of Systems Biology, 1855-1856, 2013	171*	2013
Network-based drug repositioning Z Wu, Y Wang, L Chen Molecular BioSystems 9 (6), 1268-1281, 2013	159	2013
Prediction of protein–RNA binding sites by a random forest method with combined features ZP Liu, LY Wu, Y Wang, XS Zhang, L Chen Bioinformatics 26 (13), 1616-1622, 2010	158	2010
Alignment of molecular networks by integer quadratic programming Z Li, S Zhang, Y Wang, XS Zhang, L Chen Bioinformatics 23 (13), 1631-1639, 2007	138	2007
Drug repositioning by kernel-based integration of molecular structure, molecular activity, and phenotype data Y Wang, S Chen, N Deng, Y Wang PLoS One 8 (11), e78518, 2013	128	2013
Modeling gene regulation from paired expression and chromatin accessibility data Z Duren, X Chen, R Jiang, Y Wang, WH Wong Proceedings of the National Academy of Sciences 114 (25), E4914-E4923, 2017	120	2017
NOA: a novel Network Ontology Analysis method J Wang, Q Huang, ZP Liu, Y Wang, LY Wu, L Chen, XS Zhang Nucleic acids research 39 (13), e87-e87, 2011	111	2011
Gene function prediction using labeled and unlabeled data XM Zhao, Y Wang, L Chen, K Aihara BMC bioinformatics 9 (1), 1-14, 2008	110	2008
Overlapping community detection in complex networks using symmetric binary matrix factorization ZY Zhang, Y Wang, YY Ahn Physical Review E 87 (6), 062803, 2013	108	2013
De novo prediction of RNA–protein interactions from sequence information Y Wang, X Chen, ZP Liu, Q Huang, Y Wang, D Xu, XS Zhang, R Chen, ... Molecular BioSystems 9, 133-142, 2013	105	2013
Modularity optimization in community detection of complex networks XS Zhang, RS Wang, Y Wang, J Wang, Y Qiu, L Wang, L Chen EPL (Europhysics Letters) 87 (3), 38002, 2009	104	2009
Disease-aging network reveals significant roles of aging genes in connecting genetic diseases J Wang, S Zhang, Y Wang, L Chen, XS Zhang PLoS computational biology 5 (9), e1000521, 2009	98	2009
Integrative analysis of single cell genomics data by coupled nonnegative matrix factorizations Z Duren, X Chen, M Zamanighomi, W Zeng, A Satpathy, H Chang, ... Proc Natl Acad Sci U S A 115 (30), 7723-7728, 2018	97	2018
Network-based analysis of complex diseases ZP Liu, Y Wang, XS Zhang, L Chen IET Systems Biology 6 (1), 22-33, 2012	95	2012
Identifying dysfunctional crosstalk of pathways in various regions of Alzheimer's disease brains ZP Liu, Y Wang, XS Zhang, L Chen BMC systems biology 4 (2), 1-12, 2010	92	2010
Predicting DNA-and RNA-binding proteins from sequences with kernel methods X Shao, Y Tian, L Wu, Y Wang, L Jing, N Deng Journal of theoretical biology 258 (2), 289-293, 2009	82	2009
A new trust region method for nonlinear equations J Zhang, Y Wang Mathematical Methods of Operations Research 58 (2), 283-298, 2003	80	2003
Clustering complex networks and biological networks by nonnegative matrix factorization with various similarity measures RS Wang, S Zhang, Y Wang, XS Zhang, L Chen Neurocomputing 72 (1-3), 134-141, 2008	71	2008

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