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Jeff Wintersinger
Jeff Wintersinger
PhD student in Computer Science, University of Toronto
Verified email at mail.utoronto.ca - Homepage
Title
Cited by
Year
Author Correction: The evolutionary history of 2,658 cancers
M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ...
Nature 614 (7948), E42-E42, 2023
12023
The evolutionary history of 2,658 cancers (vol 578, pg 122, 2020)
M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ...
NATURE, 2023
2023
Author Correction: The evolutionary history of 2,658 cancers (Nature,(2020), 578, 7793,(122-128), 10.1038/s41586-019-1907-7)
M Gerstung, C Jolly, I Leshchiner, S Dentro, S Gonzalez, D Rosebrock, ...
Nature Research, 2023
2023
Reconstructing cancer phylogenies using Pairtree, a clone tree reconstruction algorithm
E Kulman, J Wintersinger, Q Morris
STAR protocols 3 (4), 101706, 2022
32022
Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
Y Rubanova, R Shi, CF Harrigan, R Li, J Wintersinger, N Sahin, ...
nature communications 13 (1), 7567, 2022
2022
Crowd-sourced benchmarking of single-sample tumour subclonal reconstruction
A Salcedo, M Tarabichi, A Buchanan, SMG Espiritu, H Zhang, K Zhu, ...
bioRxiv, 2022.06. 14.495937, 2022
12022
Reconstructing complex cancer evolutionary histories from multiple bulk DNA samples using Pairtree
JA Wintersinger, SM Dobson, E Kulman, LD Stein, JE Dick, Q Morris
Blood Cancer Discovery 3 (3), 208-219, 2022
122022
Multiomic profiling of central nervous system leukemia identifies mRNA translation as a therapeutic target
RJ Vanner, SM Dobson, OI Gan, J McLeod, EM Schoof, I Grandal, ...
Blood cancer discovery 3 (1), 16-31, 2022
42022
PCAWG Evolution and Heterogeneity Working Group and the PCAWG Consortium. Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes
SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ...
Cell 184 (8), 2239-54, 2021
252021
Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes
SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ...
Cell 184 (8), 2239-2254. e39, 2021
2882021
A practical guide to cancer subclonal reconstruction from DNA sequencing
M Tarabichi, A Salcedo, AG Deshwar, M Ni Leathlobhair, J Wintersinger, ...
Nature methods 18 (2), 144-155, 2021
1272021
Reconstructing tumor evolutionary histories and clone trees in polynomial-time with SubMARine
LK Sundermann, J Wintersinger, G Rätsch, J Stoye, Q Morris
PLoS computational biology 17 (1), e1008400, 2021
132021
Colorectal cancer cells enter a diapause-like DTP state to survive chemotherapy
SK Rehman, J Haynes, E Collignon, KR Brown, Y Wang, AML Nixon, ...
Cell 184 (1), 226-242. e21, 2021
2902021
Relapse-fated latent diagnosis subclones in acute B lineage leukemia are drug tolerant and possess distinct metabolic programs
SM Dobson, L García-Prat, RJ Vanner, J Wintersinger, E Waanders, Z Gu, ...
Cancer discovery 10 (4), 568-587, 2020
892020
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
1694*2020
The evolutionary history of 2,658 cancers
M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ...
Nature 578 (7793), 122-128, 2020
8492020
Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
Y Rubanova, R Shi, CF Harrigan, R Li, J Wintersinger, N Sahin, ...
Nature communications 11 (1), 731, 2020
50*2020
PCAWG Evolution & Heterogeneity Working Group. PCAWG Consortium The evolutionary history of 2,658 cancers
M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ...
Nature 578, 122-128, 2020
502020
Pairtree: fast reconstruction of cancer evolutionary history using pairwise mutation relationships
J Wintersinger, S Dobson, J Dick, Q Morris
bioRxiv, 372219, 2020
32020
A community effort to create standards for evaluating tumor subclonal reconstruction
A Salcedo, M Tarabichi, SMG Espiritu, AG Deshwar, M David, NM Wilson, ...
Nature biotechnology 38 (1), 97-107, 2020
69*2020
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Articles 1–20