| Reconstructing tumor evolutionary histories and clone trees in polynomial-time with SubMARine LK Sundermann, J Wintersinger, G Rätsch, J Stoye, Q Morris PLoS computational biology 17 (1), e1008400, 2021 | | 2021 |
| Colorectal Cancer Cells Enter a Diapause-like DTP State to Survive Chemotherapy SK Rehman, J Haynes, E Collignon, KR Brown, Y Wang, AML Nixon, ... Cell 184 (1), 226-242. e21, 2021 | 4 | 2021 |
| A practical guide to cancer subclonal reconstruction from DNA sequencing M Tarabichi, A Salcedo, AG Deshwar, MN Leathlobhair, J Wintersinger, ... Nature methods, 1-12, 2021 | 2 | 2021 |
| Relapse-fated latent diagnosis subclones in acute B lineage leukemia are drug tolerant and possess distinct metabolic programs SM Dobson, L García-Prat, RJ Vanner, J Wintersinger, E Waanders, Z Gu, ... Cancer discovery 10 (4), 568-587, 2020 | 26 | 2020 |
| Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig Y Rubanova, R Shi, CF Harrigan, R Li, J Wintersinger, N Sahin, ... Nature communications 11 (1), 1-12, 2020 | 14* | 2020 |
| The evolutionary history of 2,658 cancers M Gerstung, C Jolly, I Leshchiner, SC Dentro, S Gonzalez, D Rosebrock, ... Nature 578 (7793), 122-128, 2020 | 231 | 2020 |
| Pairtree: fast reconstruction of cancer evolutionary history using pairwise mutation relationships JA Wintersinger, SM Dobson, JE Dick, Q Morris bioRxiv, 2020 | 1 | 2020 |
| Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... | 3 | 2020 |
| Pan-cancer analysis of whole genomes I The, TPCA of Whole, Genomes Consortium Nature 578 (7793), 82, 2020 | 317 | 2020 |
| A community effort to create standards for evaluating tumor subclonal reconstruction A Salcedo, M Tarabichi, SMG Espiritu, AG Deshwar, M David, NM Wilson, ... Nature biotechnology 38 (1), 97-107, 2020 | 22 | 2020 |
| Relapse-Initiating Clones Preexisting at Diagnosis in B-Cell Acute Lymphoblastic Leukemia Help Predict Molecular Pathways of Relapse L Garcia Prat, SM Dobson, M Chan-Seng-Yue, R Vanner, A Murison, ... Blood 132 (Supplement 1), 915-915, 2018 | 1 | 2018 |
| The evolutionary landscape of localized prostate cancers drives clinical aggression SMG Espiritu, LY Liu, Y Rubanova, V Bhandari, EM Holgersen, LM Szyca, ... Cell 173 (4), 1003-1013. e15, 2018 | 111 | 2018 |
| One species, two genomes: A critical assessment of inter-isolate variation and identification of assembly incongruence in Haemonchus contortus JA Wintersinger, GM Mariene, JD Wasmuth bioRxiv, 384008, 2018 | 3 | 2018 |
| Portraits of genetic intra-tumour heterogeneity and subclonal selection across cancer types SC Dentro, I Leshchiner, K Haase, M Tarabichi, J Wintersinger, ... BioRxiv, 312041, 2018 | 38* | 2018 |
| Abstract B2-59: PhyloSpan: Using multi-mutation reads to resolve subclonal architectures from heterogeneous tumor samples AG Deshwar, L Boyles, J Wintersinger, PC Boutros, YW Teh, Q Morris Cancer Research 75 (22 Supplement 2), B2-59-B2-59, 2015 | 2 | 2015 |
| Kablammo: an interactive, web-based BLAST results visualizer JA Wintersinger, JD Wasmuth Bioinformatics 31 (8), 1305-1306, 2015 | 37 | 2015 |
| An undergraduate perspective on LINDSAY Composer: bridging the gap between software engineering and physiology DWK Yuen, T Karaman, J Wintersinger Journal of Undergraduate Research in Alberta 3, 4-12, 2013 | | 2013 |
James WasmuthAssociate Professor, Faculty of Veterinary Medicine, University of CalgaryVerified email at ucalgary.ca
