Kathleen Marchal
Kathleen Marchal
Dept of Plant Biotechnology and Bioinformatics, Dept of Information Technology, Ghent University
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TitleCited byYear
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
M Lescot, P Déhais, G Thijs, K Marchal, Y Moreau, Y Van de Peer, ...
Nucleic acids research 30 (1), 325-327, 2002
19892002
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ...
Bioinformatics 17 (12), 1113, 2001
5032001
A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes
G Thijs, K Marchal, M Lescot, S Rombauts, B De Moor, P Rouze, ...
Journal of Computational Biology 9 (2), 447-464, 2002
4652002
A Gibbs Sampling method to detect over-represented motifs in the upstream regions of co-expressed genes
GTKMM Lescot, SRB De Moor, PRY Moreau
RECOMB 2001: proceedings of the Fifth Annual International Conference on …, 2001
465*2001
Advantages and limitations of current network inference methods
R De Smet, K Marchal
Nature Reviews Microbiology 8 (10), 717, 2010
4362010
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms
T Van den Bulcke, K Van Leemput, B Naudts, P Van Remortel, H Ma, ...
BMC bioinformatics 7 (1), 43, 2006
2662006
Adaptive quality-based clustering of gene expression profiles
F De Smet, J Mathys, K Marchal, G Thijs, B De Moor, Y Moreau
Bioinformatics 18 (5), 735, 2002
2472002
The evolutionary significance of polyploidy
Y Van de Peer, E Mizrachi, K Marchal
Nature Reviews Genetics 18 (7), 411, 2017
2322017
Strong antimicrobial activity of Lactobacillus rhamnosus GG against Salmonella typhimurium is due to accumulation of lactic acid
SCJ De Keersmaecker, TLA Verhoeven, J Desair, K Marchal, ...
FEMS Microbiology Letters 259 (1), 89-96, 2006
2322006
Computational approaches to identify promoters and cis-regulatory elements in plant genomes
S Rombauts, K Florquin, M Lescot, K Marchal, P Rouzé, Y Van de Peer
Plant physiology 132 (3), 1162, 2003
1952003
PKA and Sch9 control a molecular switch important for the proper adaptation to nutrient availability
J Roosen, K Engelen, K Marchal, J Mathys, G Griffioen, E Cameroni, ...
Molecular microbiology 55 (3), 862-880, 2005
1832005
Brominated furanones inhibit biofilm formation by Salmonella enterica serovar Typhimurium
JCA Janssens, H Steenackers, S Robijns, E Gellens, J Levin, H Zhao, ...
Applied and environmental microbiology 74 (21), 6639, 2008
1762008
Using ribosomal protein genes as reference: a tale of caution
L Thorrez, K Van Deun, LC Tranchevent, L Van Lommel, K Engelen, ...
PLoS One 3 (3), e1854, 2008
1582008
Obg and membrane depolarization are part of a microbial bet-hedging strategy that leads to antibiotic tolerance
N Verstraeten, WJ Knapen, CI Kint, V Liebens, B Van den Bergh, ...
Molecular cell 59 (1), 9-21, 2015
1362015
Chemical synthesis of (S)-4, 5-dihydroxy-2, 3-pentanedione, a bacterial signal molecule precursor, and validation of its activity in Salmonella typhimurium
SCJ De Keersmaecker, C Varszegi, N van Boxel, LW Habel, K Metzger, ...
Journal of Biological Chemistry 280 (20), 19563, 2005
1322005
Inferring transcriptional modules from ChIP-chip, motif and microarray data
K Lemmens, T Dhollander, T De Bie, P Monsieurs, K Engelen, B Smets, ...
Genome biology 7 (5), R37, 2006
1262006
The E2F-Regulated Gene Chk1 Is Highly Expressed in Triple-Negative Estrogen Receptor−/Progesterone Receptor−/HER-2− Breast Carcinomas
L Verlinden, I Vanden Bempt, G Eelen, M Drijkoningen, I Verlinden, ...
Cancer research 67 (14), 6574, 2007
1242007
The effect of a Sertoli cell-selective knockout of the androgen receptor on testicular gene expression in prepubertal mice
E Denolet, K De Gendt, J Allemeersch, K Engelen, K Marchal, ...
Molecular Endocrinology 20 (2), 321-334, 2006
1242006
Functional analysis of luxS in the probiotic strain Lactobacillus rhamnosus GG reveals a central metabolic role important for growth and biofilm formation
S Lebeer, SCJ De Keersmaecker, TLA Verhoeven, AA Fadda, K Marchal, ...
Journal of bacteriology 189 (3), 860, 2007
1222007
A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2
I Thiele, D Hyduke, B Steeb, G Fankam, D Allen, S Bazzani, P Charusanti, ...
BMC systems biology 5 (1), 8, 2011
1212011
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