Kathleen Marchal
Kathleen Marchal
Dept of Plant Biotechnology and Bioinformatics, Dept of Information Technology, Ghent University
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TitleCited byYear
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
M Lescot, P Déhais, G Thijs, K Marchal, Y Moreau, Y Van de Peer, ...
Nucleic acids research 30 (1), 325-327, 2002
18802002
A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
G Thijs, M Lescot, K Marchal, S Rombauts, B De Moor, P Rouze, ...
Bioinformatics 17 (12), 1113, 2001
4982001
A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes
G Thijs, K Marchal, M Lescot, S Rombauts, B De Moor, P Rouze, ...
Journal of Computational Biology 9 (2), 447-464, 2002
4592002
A Gibbs Sampling method to detect over-represented motifs in the upstream regions of co-expressed genes
GTKMM Lescot, SRB De Moor, PRY Moreau
RECOMB 2001: proceedings of the Fifth Annual International Conference on …, 2001
459*2001
Advantages and limitations of current network inference methods
R De Smet, K Marchal
Nature Reviews Microbiology 8 (10), 717, 2010
4262010
SynTReN: a generator of synthetic gene expression data for design and analysis of structure learning algorithms
T Van den Bulcke, K Van Leemput, B Naudts, P Van Remortel, H Ma, ...
BMC bioinformatics 7 (1), 43, 2006
2602006
Adaptive quality-based clustering of gene expression profiles
F De Smet, J Mathys, K Marchal, G Thijs, B De Moor, Y Moreau
Bioinformatics 18 (5), 735, 2002
2422002
Strong antimicrobial activity of Lactobacillus rhamnosus GG against Salmonella typhimurium is due to accumulation of lactic acid
SCJ De Keersmaecker, TLA Verhoeven, J Desair, K Marchal, ...
FEMS microbiology letters 259 (1), 89-96, 2006
2162006
Computational approaches to identify promoters and cis-regulatory elements in plant genomes
S Rombauts, K Florquin, M Lescot, K Marchal, P Rouzé, Y Van de Peer
Plant physiology 132 (3), 1162, 2003
1912003
The evolutionary significance of polyploidy
Y Van de Peer, E Mizrachi, K Marchal
Nature Reviews Genetics 18 (7), 411, 2017
1772017
PKA and Sch9 control a molecular switch important for the proper adaptation to nutrient availability
J Roosen, K Engelen, K Marchal, J Mathys, G Griffioen, E Cameroni, ...
Molecular microbiology 55 (3), 862-880, 2005
1752005
Brominated furanones inhibit biofilm formation by Salmonella enterica serovar Typhimurium
JCA Janssens, H Steenackers, S Robijns, E Gellens, J Levin, H Zhao, ...
Applied and environmental microbiology 74 (21), 6639, 2008
1682008
Using ribosomal protein genes as reference: a tale of caution
L Thorrez, K Van Deun, LC Tranchevent, L Van Lommel, K Engelen, ...
PLoS One 3 (3), e1854, 2008
1532008
Chemical synthesis of (S)-4, 5-dihydroxy-2, 3-pentanedione, a bacterial signal molecule precursor, and validation of its activity in Salmonella typhimurium
SCJ De Keersmaecker, C Varszegi, N van Boxel, LW Habel, K Metzger, ...
Journal of Biological Chemistry 280 (20), 19563, 2005
1322005
Inferring transcriptional modules from ChIP-chip, motif and microarray data
K Lemmens, T Dhollander, T De Bie, P Monsieurs, K Engelen, B Smets, ...
Genome biology 7 (5), R37, 2006
1242006
The E2F-Regulated Gene Chk1 Is Highly Expressed in Triple-Negative Estrogen Receptor−/Progesterone Receptor−/HER-2− Breast Carcinomas
L Verlinden, I Vanden Bempt, G Eelen, M Drijkoningen, I Verlinden, ...
Cancer research 67 (14), 6574, 2007
1232007
Obg and membrane depolarization are part of a microbial bet-hedging strategy that leads to antibiotic tolerance
N Verstraeten, WJ Knapen, CI Kint, V Liebens, B Van den Bergh, ...
Molecular cell 59 (1), 9-21, 2015
1212015
Functional analysis of luxS in the probiotic strain Lactobacillus rhamnosus GG reveals a central metabolic role important for growth and biofilm formation
S Lebeer, SCJ De Keersmaecker, TLA Verhoeven, AA Fadda, K Marchal, ...
Journal of bacteriology 189 (3), 860, 2007
1192007
The effect of a Sertoli cell-selective knockout of the androgen receptor on testicular gene expression in prepubertal mice
E Denolet, K De Gendt, J Allemeersch, K Engelen, K Marchal, ...
Molecular Endocrinology 20 (2), 321-334, 2006
1192006
A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2
I Thiele, D Hyduke, B Steeb, G Fankam, D Allen, S Bazzani, P Charusanti, ...
BMC systems biology 5 (1), 8, 2011
1152011
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