Gabriel Moreno-Hagelsieb

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Julio Collado-VidesProfessor of Computational Genomics, CCG, UNAMVerified email at ccg.unam.mx
Sarath Chandra JangaAssociate Professor of Informatics and Computing, Indiana University (IUPUI)Verified email at iupui.edu
Arturo Medrano-SotoUniversity of California, San DiegoVerified email at ucsd.edu
Gustavo SantoyoUniversidad Michoacana de San Nicolás de HidalgoVerified email at umich.mx
Josh D. NeufeldDepartment of Biology, University of WaterlooVerified email at uwaterloo.ca
Michael DJ LynchMetagenom Bio Life Science and Department of Biology, University of WaterlooVerified email at uwaterloo.ca
Andrew D PatersonSenior Scientist, Hospital for Sick ChildrenVerified email at utoronto.ca
Mark S. SilverbergMount Sinai Hospital, University of TorontoVerified email at mtsinai.on.ca
Milton SaierProfessor of Molecular Biology, UC San DiegoVerified email at ucsd.edu
Jack GreenblattProfessor, University of TorontoVerified email at utoronto.ca
Jennifer StearnsMcMaster UniversityVerified email at mcmaster.ca
Sadhna PhanseBioinformatician, Unversity of Toronto, University of ReginaVerified email at utoronto.ca
Vamsee ReddyMD (2021), MSc Medical Sciences, Boston UniversityVerified email at bu.edu
Bernard R. GlickProfessor Emeritus, Department of Biology, University of Waterloo, CanadaVerified email at uwaterloo.ca
Andrea K BartramUniversity of WaterlooVerified email at uwaterloo.ca
Luis David AlcarazFacultad de Ciencias. Universidad Nacional Autónoma de México (UNAM)Verified email at ciencias.unam.mx
John ParkinsonSenior Scientist, Hospital for Sick ChildrenVerified email at utoronto.ca
Roland ArnoldUniversity of BirminghamVerified email at bham.ac.uk
Veronica JimenezInstituto de Biotecnología UNAMVerified email at ibt.unam.mx
Alberto PaccanaroProfessor at Royal Holloway, University of LondonVerified email at cs.rhul.ac.uk

Gabriel Moreno-Hagelsieb

Wilfrid Laurier University

Verified email at wlu.ca - Homepage

Computational biology Genomics Metagenomics Comparative Genomics Functional interactions


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Plant growth-promoting bacterial endophytes G Santoyo, G Moreno-Hagelsieb, M del Carmen Orozco-Mosqueda, ... Microbiological research 183, 92-99, 2016	824	2016
Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end Illumina reads AK Bartram, MDJ Lynch, JC Stearns, G Moreno-Hagelsieb, JD Neufeld Applied and environmental microbiology 77 (11), 3846-3852, 2011	768	2011
The transporter classification database (TCDB): recent advances MH Saier Jr, VS Reddy, BV Tsu, MS Ahmed, C Li, G Moreno-Hagelsieb Nucleic acids research 44 (D1), D372-D379, 2016	484	2016
Operons in Escherichia coli: genomic analyses and predictions H Salgado, G Moreno-Hagelsieb, TF Smith, J Collado-Vides Proceedings of the National Academy of Sciences 97 (12), 6652-6657, 2000	454	2000
Choosing BLAST options for better detection of orthologs as reciprocal best hits G Moreno-Hagelsieb, K Latimer Bioinformatics 24 (3), 319-324, 2008	448	2008
The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons V González, RI Santamaría, P Bustos, I Hernández-González, ... Proceedings of the National Academy of Sciences 103 (10), 3834-3839, 2006	402	2006
Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins P Hu, SC Janga, M Babu, JJ Díaz-Mejía, G Butland, W Yang, O Pogoutse, ... PLoS biology 7 (4), e1000096, 2009	373	2009
Bacterial biogeography of the human digestive tract JC Stearns, MDJ Lynch, DB Senadheera, HC Tenenbaum, MB Goldberg, ... Scientific reports 1 (1), 1-9, 2011	372	2011
Association of host genome with intestinal microbial composition in a large healthy cohort W Turpin, O Espin-Garcia, W Xu, MS Silverberg, D Kevans, MI Smith, ... Nature genetics 48 (11), 1413-1417, 2016	294	2016
eSGA: E. coli synthetic genetic array analysis G Butland, M Babu, JJ Diaz-Mejia, F Bohdana, S Phanse, B Gold, W Yang, ... Nature methods 5 (9), 789-795, 2008	257	2008
A powerful non-homology method for the prediction of operons in prokaryotes G Moreno-Hagelsieb, J Collado-Vides Bioinformatics 18 (suppl_1), S329-S336, 2002	251	2002
Evaluating bias of Illumina-based bacterial 16S rRNA gene profiles K Kennedy, MW Hall, MDJ Lynch, G Moreno-Hagelsieb, JD Neufeld Applied and environmental microbiology 80 (18), 5717-5722, 2014	211	2014
Understanding the evolutionary relationships and major traits of Bacillus through comparative genomics LD Alcaraz, G Moreno-Hagelsieb, LE Eguiarte, V Souza, ... BMC genomics 11 (1), 1-17, 2010	193	2010
The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments V González, P Bustos, MA Ramírez-Romero, A Medrano-Soto, H Salgado, ... Genome biology 4 (6), 1-13, 2003	168	2003
A comparative genomics approach to prediction of new members of regulons K Tan, G Moreno-Hagelsieb, J Collado-Vides, GD Stormo Genome research 11 (4), 566-584, 2001	151	2001
Whole-genome expression profiling defines the HrpL regulon of Pseudomonas syringae pv. tomato DC3000, allows de novo reconstruction of the Hrp cis element, and identifies novel … AO Ferreira, CR Myers, JS Gordon, GB Martin, M Vencato, A Collmer, ... Molecular Plant-Microbe Interactions 19 (11), 1167-1179, 2006	126	2006
Quickly finding orthologs as reciprocal best hits with BLAT, LAST, and UBLAST: how much do we miss? N Ward, G Moreno-Hagelsieb PloS one 9 (7), e101850, 2014	121	2014
Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways M Babu, JJ Díaz-Mejía, J Vlasblom, A Gagarinova, S Phanse, C Graham, ... PLoS genetics 7 (11), e1002377, 2011	102	2011
A metagenomic framework for the study of airborne microbial communities S Yooseph, C Andrews-Pfannkoch, A Tenney, J McQuaid, S Williamson, ... PloS one 8 (12), e81862, 2013	98	2013
Quantitative Genome-Wide Genetic Interaction Screens Reveal Global Epistatic Relationships of Protein Complexes in Escherichia coli M Babu, R Arnold, C Bundalovic-Torma, A Gagarinova, KS Wong, ... PLoS genetics 10 (2), e1004120, 2014	96	2014

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