| Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end Illumina reads AK Bartram, MDJ Lynch, JC Stearns, G Moreno-Hagelsieb, JD Neufeld Appl. Environ. Microbiol. 77 (11), 3846-3852, 2011 | 596 | 2011 |
| Operons in Escherichia coli: genomic analyses and predictions H Salgado, G Moreno-Hagelsieb, TF Smith, J Collado-Vides Proceedings of the National Academy of Sciences 97 (12), 6652-6657, 2000 | 410 | 2000 |
| Choosing BLAST options for better detection of orthologs as reciprocal best hits G Moreno-Hagelsieb, K Latimer Bioinformatics 24 (3), 319-324, 2007 | 367 | 2007 |
| The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons V González, RI Santamaría, P Bustos, I Hernández-González, ... Proceedings of the National Academy of Sciences 103 (10), 3834-3839, 2006 | 351 | 2006 |
| Plant growth-promoting bacterial endophytes G Santoyo, G Moreno-Hagelsieb, M del Carmen Orozco-Mosqueda, ... Microbiological research 183, 92-99, 2016 | 340 | 2016 |
| Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins P Hu, SC Janga, M Babu, JJ Díaz-Mejía, G Butland, W Yang, O Pogoutse, ... PLoS biology 7 (4), e1000096, 2009 | 334 | 2009 |
| Bacterial biogeography of the human digestive tract JC Stearns, MDJ Lynch, DB Senadheera, HC Tenenbaum, MB Goldberg, ... Scientific reports 1, 170, 2011 | 280 | 2011 |
| The transporter classification database (TCDB): recent advances MH Saier Jr, VS Reddy, BV Tsu, MS Ahmed, C Li, G Moreno-Hagelsieb Nucleic acids research 44 (D1), D372-D379, 2015 | 255 | 2015 |
| eSGA: E. coli synthetic genetic array analysis G Butland, M Babu, JJ Díaz-Mejía, F Bohdana, S Phanse, B Gold, W Yang, ... Nature methods 5 (9), 789, 2008 | 236 | 2008 |
| A powerful non-homology method for the prediction of operons in prokaryotes G Moreno-Hagelsieb, J Collado-Vides Bioinformatics 18 (suppl_1), S329-S336, 2002 | 234 | 2002 |
| The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments V González, P Bustos, MA Ramírez-Romero, A Medrano-Soto, H Salgado, ... Genome biology 4 (6), R36, 2003 | 150 | 2003 |
| Evaluating bias of Illumina-based bacterial 16S rRNA gene profiles K Kennedy, MW Hall, MDJ Lynch, G Moreno-Hagelsieb, JD Neufeld Appl. Environ. Microbiol. 80 (18), 5717-5722, 2014 | 142 | 2014 |
| A comparative genomics approach to prediction of new members of regulons K Tan, G Moreno-Hagelsieb, J Collado-Vides, GD Stormo Genome research 11 (4), 566-584, 2001 | 140 | 2001 |
| Understanding the evolutionary relationships and major traits of Bacillus through comparative genomics LD Alcaraz, G Moreno-Hagelsieb, LE Eguiarte, V Souza, ... BMC genomics 11 (1), 332, 2010 | 139 | 2010 |
| Association of host genome with intestinal microbial composition in a large healthy cohort W Turpin, O Espin-Garcia, W Xu, MS Silverberg, D Kevans, MI Smith, ... Nature genetics 48 (11), 1413, 2016 | 126 | 2016 |
| Whole-genome expression profiling defines the HrpL regulon of Pseudomonas syringae pv. tomato DC3000, allows de novo reconstruction of the Hrp cis element, and identifies novel … AO Ferreira, CR Myers, JS Gordon, GB Martin, M Vencato, A Collmer, ... Molecular Plant-Microbe Interactions 19 (11), 1167-1179, 2006 | 113 | 2006 |
| Genetic interaction maps in Escherichia coli reveal functional crosstalk among cell envelope biogenesis pathways M Babu, JJ Díaz-Mejía, J Vlasblom, A Gagarinova, S Phanse, C Graham, ... PLoS genetics 7 (11), e1002377, 2011 | 81 | 2011 |
| Successful lateral transfer requires codon usage compatibility between foreign genes and recipient genomes A Medrano-Soto, G Moreno-Hagelsieb, P Vinuesa, JA Christen, ... Molecular biology and evolution 21 (10), 1884-1894, 2004 | 81 | 2004 |
| Quickly finding orthologs as reciprocal best hits with BLAT, LAST, and UBLAST: how much do we miss? N Ward, G Moreno-Hagelsieb PloS one 9 (7), e101850, 2014 | 75 | 2014 |
| Conservation of DNA curvature signals in regulatory regions of prokaryotic genes R Jauregui, C Abreu‐Goodger, G Moreno‐Hagelsieb, J Collado‐Vides, ... Nucleic acids research 31 (23), 6770-6777, 2003 | 75 | 2003 |
Julio Collado-VidesProfessor of Computational Genomics, CCG, UNAMVerified email at ccg.unam.mx