João Carlos Setubal

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Nalvo F Almeida JrProfessor of Bioinformatics, Federal University of Mato Grosso do Sul, BrazilVerified email at facom.ufms.br
Aline Maria da SilvaUniversidade de São PauloVerified email at iq.usp.br
Luciano Antonio DigiampietriUniversity of Sao PauloVerified email at usp.br
Sergio Verjovski-AlmeidaProfessor Titular Senior, Instituto de Química, Universidade de São PauloVerified email at iq.usp.br
Brett TylerOregon State UniversityVerified email at vt.edu
Emmanuel Dias-NetoA.C.Camargo Cancer CenterVerified email at cipe.accamargo.org.br
J. B. Jones + Jeffrey Jonesuniversity of floridaVerified email at ufl.edu
Joao MeidanisComputer Sciences, University of CampinasVerified email at ic.unicamp.br
Andrew Maltez ThomasUniversity of TrentoVerified email at unitn.it
Boris A. VinatzerProfessor, SPES, Virginia TechVerified email at vt.edu
Jesus Aparecido FerroUniversidade Estadual Paulista/UNESP - Faculdade de Ciências Agrárias e Veterinárias da JaboticabalVerified email at fcav.unesp.br
Andrew S WarrenResearch Assistant Professor at University of Virginia, Biocomplexity Institute & InitiativeVerified email at vt.edu
Nian WangProfessor, IFAS, University of Florida; Editor-in-Chief, PhytopathologyVerified email at ufl.edu
Joaquim Martins JuniorCentro Nacional de Pesquisa em Energia e Materias, LNBRVerified email at lnbr.cnpem.br
José S. L. PatanéBioinformatician - Lab. Especial de Ciclo Celular, Instituto ButantanVerified email at butantan.gov.br
Richard J. AndersonProfessor of Computer Science and Engineering, University of WashingtonVerified email at cs.washington.edu
Ricardo Jose GiordanoUniversidade de Sao PauloVerified email at iq.usp.br
David HaakeProfessor of Medicine in Residence, UCLAVerified email at ucla.edu
Patricia C. Dos SantosWake Forest UniversityVerified email at wfu.edu
Ray DixonProfessor of Molecular Microbiology. John Innes CentreVerified email at jic.ac.uk

João Carlos Setubal

Professor of Bioinformatics, University of Sao Paulo

Verified email at iq.usp.br - Homepage

Microbiomes Genomics Metagenomics Transcriptomics Bioinformatics


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Comparison of the genomes of two Xanthomonas pathogens with differing host specificities ACR da Silva, JA Ferro, FC Reinach, CS Farah, LR Furlan, RB Quaggio, ... Nature 417 (6887), 459-463, 2002	1271	2002
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1204	1997
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1204	1997
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1204	1997
Introduction to computational molecular biology JC Setubal, J Meidanis, . ̤ Setubal-Meidanis PWS Pub., 1997	1204	1997
The genome of woodland strawberry (Fragaria vesca) V Shulaev, DJ Sargent, RN Crowhurst, TC Mockler, O Folkerts, ... Nature genetics 43 (2), 109-116, 2011	1111	2011
The genome sequence of the plant pathogen Xylella fastidiosa AJG Simpson, FC Reinach, P Arruda, FA Abreu, M Acencio, R Alvarenga, ... Nature 406 (6792), 151-157, 2000	1033	2000
The genome of the natural genetic engineer Agrobacterium tumefaciens C58 DW Wood, JC Setubal, R Kaul, DE Monks, JP Kitajima, VK Okura, Y Zhou, ... science 294 (5550), 2317-2323, 2001	920	2001
Transcriptome analysis of the acoelomate human parasite Schistosoma mansoni S Verjovski-Almeida, R DeMarco, EAL Martins, PEM Guimarães, ... Nature genetics 35 (2), 148-157, 2003	558	2003
Comparative Genomics of Two Leptospira interrogans Serovars Reveals Novel Insights into Physiology and Pathogenesis A Nascimento, AI Ko, EAL Martins, CB Monteiro-Vitorello, PL Ho, ... Journal of bacteriology 186 (7), 2164-2172, 2004	499	2004
Protein secretion systems in bacterial-host associations, and their description in the Gene Ontology TT Tseng, BM Tyler, JC Setubal BMC microbiology 9 (1), 1-9, 2009	472	2009
Comparative Analyses of the Complete Genome Sequences of Pierce's Disease and Citrus Variegated Chlorosis Strains of Xylella fastidiosa MA Van Sluys, MC De Oliveira, CB Monteiro-Vitorello, CY Miyaki, ... Journal of bacteriology 185 (3), 1018-1026, 2003	377	2003
Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes PC Dos Santos, Z Fang, SW Mason, JC Setubal, R Dixon BMC genomics 13 (1), 1-12, 2012	298	2012
Genome Sequence of Azotobacter vinelandii, an Obligate Aerobe Specialized To Support Diverse Anaerobic Metabolic Processes JC Setubal, P Dos Santos, BS Goldman, H Ertesvag, G Espin, LM Rubio, ... Journal of bacteriology 191 (14), 4534-4545, 2009	248	2009
Genome features of Leptospira interrogans serovar Copenhageni ALTO Nascimento, S Verjovski-Almeida, MA Van Sluys, ... Brazilian journal of medical and biological research 37 (4), 459-477, 2004	240	2004
Genome Sequences of Three Agrobacterium Biovars Help Elucidate the Evolution of Multichromosome Genomes in Bacteria SC Slater, BS Goldman, B Goodner, JC Setubal, SK Farrand, EW Nester, ... Journal of bacteriology 191 (8), 2501-2511, 2009	239	2009
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019	223	2019
Comparative genomic analysis of plant-associated bacteria MA Van Sluys, CB Monteiro-Vitorello, LEA Camargo, CFM Menck, ... Annual review of phytopathology 40 (1), 169-189, 2002	221	2002
Lipoprotein computational prediction in spirochaetal genomes JC Setubal, M Reis, J Matsunaga, DA Haake Microbiology (Reading, England) 152 (Pt 1), 113, 2006	215	2006
The plant pathogen Pseudomonas syringae pv. tomato is genetically monomorphic and under strong selection to evade tomato immunity R Cai, J Lewis, S Yan, H Liu, CR Clarke, F Campanile, NF Almeida, ... PLoS Pathog 7 (8), e1002130, 2011	208	2011

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