Musaddeque Ahmed
Musaddeque Ahmed
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Cited by
Genomic hallmarks of localized, non-indolent prostate cancer
M Fraser, VY Sabelnykova, TN Yamaguchi, LE Heisler, J Livingstone, ...
Nature 541 (7637), 359-364, 2017
Widespread and functional RNA circularization in localized prostate cancer
S Chen, V Huang, X Xu, J Livingstone, F Soares, J Jeon, Y Zeng, JT Hua, ...
Cell 176 (4), 831-843. e22, 2019
Risk SNP-mediated promoter-enhancer switching drives prostate cancer through lncRNA PCAT19
JT Hua, M Ahmed, H Guo, Y Zhang, S Chen, F Soares, J Lu, S Zhou, ...
Cell 174 (3), 564-575. e18, 2018
Onco-multi-OMICS approach: a new frontier in cancer research
S Chakraborty, MI Hosen, M Ahmed, HU Shekhar
BioMed research international 2018, 2018
Modulation of long noncoding RNAs by risk SNPs underlying genetic predispositions to prostate cancer
H Guo, M Ahmed, F Zhang, CQ Yao, SD Li, Y Liang, J Hua, F Soares, ...
Nature genetics 48 (10), 1142-1150, 2016
ONECUT2 is a driver of neuroendocrine prostate cancer
H Guo, X Ci, M Ahmed, JT Hua, F Soares, D Lin, L Puca, A Vosoughi, ...
Nature communications 10 (1), 278, 2019
Lysine-specific demethylase 1 has dual functions as a major regulator of androgen receptor transcriptional activity
C Cai, HH He, S Gao, S Chen, Z Yu, Y Gao, S Chen, MW Chen, J Zhang, ...
Cell reports 9 (5), 1618-1627, 2014
Reactivation of androgen receptor-regulated lipid biosynthesis drives the progression of castration-resistant prostate cancer
W Han, S Gao, D Barrett, M Ahmed, D Han, JA Macoska, HH He, C Cai
Oncogene 37 (6), 710-721, 2018
LSD1-Mediated Epigenetic Reprogramming Drives CENPE Expression and Prostate Cancer ProgressionCENPE Is a Therapeutic Target for CRPC
Y Liang, M Ahmed, H Guo, F Soares, JT Hua, S Gao, C Lu, C Poon, ...
Cancer research 77 (20), 5479-5490, 2017
Transposable elements are a significant contributor to tandem repeats in the human genome
M Ahmed, P Liang
Comparative and Functional Genomics 2012, 2012
A computational approach for identification of epitopes in dengue virus envelope protein: a step towards designing a universal dengue vaccine targeting endemic regions
S Chakraborty, R Chakravorty, M Ahmed, A Rahman, TM Waise, ...
In silico biology 10 (5-6), 235-246, 2010
Chromatin binding of FOXA1 is promoted by LSD1-mediated demethylation in prostate cancer
S Gao, S Chen, D Han, Z Wang, M Li, W Han, A Besschetnova, M Liu, ...
Nature genetics 52 (10), 1011-1017, 2020
Noncoding mutations target cis-regulatory elements of the FOXA1 plexus in prostate cancer
S Zhou, JR Hawley, F Soares, G Grillo, M Teng, SA Madani Tonekaboni, ...
Nature communications 11 (1), 441, 2020
Comparative network clustering of direct repeats (DRs) and cas genes confirms the possibility of the horizontal transfer of CRISPR locus among bacteria
S Chakraborty, AP Snijders, R Chakravorty, M Ahmed, AM Tarek, ...
Molecular Phylogenetics and Evolution 56 (3), 878-887, 2010
Genome-wide germline correlates of the epigenetic landscape of prostate cancer
KE Houlahan, YJ Shiah, A Gusev, J Yuan, M Ahmed, A Shetty, ...
Nature medicine 25 (10), 1615-1626, 2019
An androgen receptor switch underlies lineage infidelity in treatment-resistant prostate cancer
A Davies, S Nouruzi, D Ganguli, T Namekawa, D Thaper, S Linder, ...
Nature cell biology 23 (9), 1023-1034, 2021
Cistrome partitioning reveals convergence of somatic mutations and risk variants on master transcription regulators in primary prostate tumors
P Mazrooei, KJ Kron, Y Zhu, S Zhou, G Grillo, T Mehdi, M Ahmed, ...
Cancer Cell 36 (6), 674-689. e6, 2019
Integration of online omics-data resources for cancer research
T Das, G Andrieux, M Ahmed, S Chakraborty
Frontiers in Genetics 11, 578345, 2020
Circulating miRNAs as non-invasive biomarkers to predict aggressive prostate cancer after radical prostatectomy
C Hoey, M Ahmed, A Fotouhi Ghiam, D Vesprini, X Huang, K Commisso, ...
Journal of translational medicine 17 (1), 1-11, 2019
Forkhead domain mutations in FOXA1 drive prostate cancer progression
S Gao, S Chen, D Han, D Barrett, W Han, M Ahmed, S Patalano, ...
Cell research 29 (9), 770-772, 2019
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