| Genomic hallmarks of localized, non-indolent prostate cancer M Fraser, VY Sabelnykova, TN Yamaguchi, LE Heisler, J Livingstone, ... Nature 541 (7637), 359-364, 2017 | 516 | 2017 |
| Widespread and functional RNA circularization in localized prostate cancer S Chen, V Huang, X Xu, J Livingstone, F Soares, J Jeon, Y Zeng, JT Hua, ... Cell 176 (4), 831-843. e22, 2019 | 306 | 2019 |
| Risk SNP-mediated promoter-enhancer switching drives prostate cancer through lncRNA PCAT19 JT Hua, M Ahmed, H Guo, Y Zhang, S Chen, F Soares, J Lu, S Zhou, ... Cell 174 (3), 564-575. e18, 2018 | 250 | 2018 |
| Onco-multi-OMICS approach: a new frontier in cancer research S Chakraborty, MI Hosen, M Ahmed, HU Shekhar BioMed research international 2018, 2018 | 217 | 2018 |
| Modulation of long noncoding RNAs by risk SNPs underlying genetic predispositions to prostate cancer H Guo, M Ahmed, F Zhang, CQ Yao, SD Li, Y Liang, J Hua, F Soares, ... Nature genetics 48 (10), 1142-1150, 2016 | 205 | 2016 |
| ONECUT2 is a driver of neuroendocrine prostate cancer H Guo, X Ci, M Ahmed, JT Hua, F Soares, D Lin, L Puca, A Vosoughi, ... Nature communications 10 (1), 278, 2019 | 146 | 2019 |
| Lysine-specific demethylase 1 has dual functions as a major regulator of androgen receptor transcriptional activity C Cai, HH He, S Gao, S Chen, Z Yu, Y Gao, S Chen, MW Chen, J Zhang, ... Cell reports 9 (5), 1618-1627, 2014 | 118 | 2014 |
| Reactivation of androgen receptor-regulated lipid biosynthesis drives the progression of castration-resistant prostate cancer W Han, S Gao, D Barrett, M Ahmed, D Han, JA Macoska, HH He, C Cai Oncogene 37 (6), 710-721, 2018 | 77 | 2018 |
| LSD1-Mediated Epigenetic Reprogramming Drives CENPE Expression and Prostate Cancer ProgressionCENPE Is a Therapeutic Target for CRPC Y Liang, M Ahmed, H Guo, F Soares, JT Hua, S Gao, C Lu, C Poon, ... Cancer research 77 (20), 5479-5490, 2017 | 73 | 2017 |
| Transposable elements are a significant contributor to tandem repeats in the human genome M Ahmed, P Liang Comparative and Functional Genomics 2012, 2012 | 71 | 2012 |
| A computational approach for identification of epitopes in dengue virus envelope protein: a step towards designing a universal dengue vaccine targeting endemic regions S Chakraborty, R Chakravorty, M Ahmed, A Rahman, TM Waise, ... In silico biology 10 (5-6), 235-246, 2010 | 64 | 2010 |
| Chromatin binding of FOXA1 is promoted by LSD1-mediated demethylation in prostate cancer S Gao, S Chen, D Han, Z Wang, M Li, W Han, A Besschetnova, M Liu, ... Nature genetics 52 (10), 1011-1017, 2020 | 61 | 2020 |
| Noncoding mutations target cis-regulatory elements of the FOXA1 plexus in prostate cancer S Zhou, JR Hawley, F Soares, G Grillo, M Teng, SA Madani Tonekaboni, ... Nature communications 11 (1), 441, 2020 | 58 | 2020 |
| Comparative network clustering of direct repeats (DRs) and cas genes confirms the possibility of the horizontal transfer of CRISPR locus among bacteria S Chakraborty, AP Snijders, R Chakravorty, M Ahmed, AM Tarek, ... Molecular Phylogenetics and Evolution 56 (3), 878-887, 2010 | 58 | 2010 |
| Genome-wide germline correlates of the epigenetic landscape of prostate cancer KE Houlahan, YJ Shiah, A Gusev, J Yuan, M Ahmed, A Shetty, ... Nature medicine 25 (10), 1615-1626, 2019 | 52 | 2019 |
| An androgen receptor switch underlies lineage infidelity in treatment-resistant prostate cancer A Davies, S Nouruzi, D Ganguli, T Namekawa, D Thaper, S Linder, ... Nature cell biology 23 (9), 1023-1034, 2021 | 49 | 2021 |
| Cistrome partitioning reveals convergence of somatic mutations and risk variants on master transcription regulators in primary prostate tumors P Mazrooei, KJ Kron, Y Zhu, S Zhou, G Grillo, T Mehdi, M Ahmed, ... Cancer Cell 36 (6), 674-689. e6, 2019 | 47 | 2019 |
| Integration of online omics-data resources for cancer research T Das, G Andrieux, M Ahmed, S Chakraborty Frontiers in Genetics 11, 578345, 2020 | 45 | 2020 |
| Circulating miRNAs as non-invasive biomarkers to predict aggressive prostate cancer after radical prostatectomy C Hoey, M Ahmed, A Fotouhi Ghiam, D Vesprini, X Huang, K Commisso, ... Journal of translational medicine 17 (1), 1-11, 2019 | 43 | 2019 |
| Forkhead domain mutations in FOXA1 drive prostate cancer progression S Gao, S Chen, D Han, D Barrett, W Han, M Ahmed, S Patalano, ... Cell research 29 (9), 770-772, 2019 | 28 | 2019 |
Changmeng CaiUniversity of Massachusetts BostonVerified email at umb.edu
