Automated integration of trees and traits: a case study using paired fin loss across teleost fishes LM Jackson, PC Fernando, JS Hanscom, JP Balhoff, PM Mabee Systematic biology 67 (4), 559-575, 2018 | 16 | 2018 |
Integration of anatomy ontology data with protein–protein interaction networks improves the candidate gene prediction accuracy for anatomical entities PC Fernando, PM Mabee, E Zeng BMC bioinformatics 21, 1-26, 2020 | 12 | 2020 |
Protein-protein interaction (PPI) network analysis reveals important hub proteins and sub-network modules for root development in rice (Oryza sativa) SS Wimalagunasekara, JWJK Weeraman, S Tirimanne, PC Fernando Journal of Genetic Engineering and Biotechnology 21 (1), 69, 2023 | 7 | 2023 |
An insight into tropical milk microbiome: Bacterial community composition of cattle milk produced in Sri Lanka DU Rajawardana, PC Fernando, PJ Biggs, IGN Hewajulige, ... International Dairy Journal 126, 105266, 2022 | 2 | 2022 |
Protein–protein interaction network module changes associated with the vertebrate fin-to-limb transition PC Fernando, PM Mabee, E Zeng Scientific reports 13 (1), 22594, 2023 | 1 | 2023 |
Investigating Evolutionary Phenotypic Transitions Using Integrative Biological Network Frameworks SPC Fernando University of South Dakota, 2018 | 1 | 2018 |
A generic bioinformatics pipeline to integrate large-scale trait data with large phylogenies PC Fernando, LM Jackson, E Zeng, PM Mabee, JP Balhoff 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2017 | 1 | 2017 |
Gene network module changes associated with the vertebrate fin to limb transition PC Fernando, PM Mabee, E Zeng bioRxiv, 2021.01. 28.428646, 2021 | | 2021 |
analysis of raw cattle milk microbiota in Sri Lanka employing Illumina MiSeq platform DU Rajawardana, PC Fernando, PJ Biggs, CM Nanayakkara, ... University of Colombo, 2021 | | 2021 |
Multifaceted importance of native dairy microorganisms DU Rajawardana, CM Nanayakkara, IGN Hewajulige, PC Fernando University of Colombo, 2020 | | 2020 |
The Integrative use of Anatomy Ontology and Protein-protein Interaction Networks to Study Evolutionary Phenotypic Transitions. P Fernando, EZP Mabee ICBO, 2018 | | 2018 |
Automated Integration of Phenomics And Phylogenetic Data To Investigate Paired Fin Evolution Across Teleost Fishes LM Jackson, P Fernando, J Hanscom, JP Balhoff, PM Mabee INTEGRATIVE AND COMPARATIVE BIOLOGY 57, E301-E301, 2017 | | 2017 |
Investigating the Genomic Basis of Phenotypic Transitions Using a Novel Integrative Analysis of Anatomy Ontology and Protein-Protein Interaction Networks P Fernando, P Mabee, E Zeng | | |