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David Becerra
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Fast and flexible protein design using deep graph neural networks
A Strokach, D Becerra, C Corbi-Verge, A Perez-Riba, PM Kim
Cell systems 11 (4), 402-411. e4, 2020
2082020
Open-Phylo: a customizable crowd-computing platform for multiple sequence alignment
D Kwak, A Kam, D Becerra, Q Zhou, A Hops, E Zarour, A Kam, ...
Genome biology 14, 1-12, 2013
422013
A parallel multi-objective ab initio approach for protein structure prediction
D Becerra, A Sandoval, D Restrepo-Montoya, FN Luis
2010 IEEE international conference on bioinformatics and biomedicine (BIBM …, 2010
312010
A novel ab-initio genetic-based approach for protein folding prediction
SRD Torres, DCB Romero, LFN Vasquez, YJP Ardila
Proceedings of the 9th annual conference on Genetic and evolutionary …, 2007
212007
Fast and flexible design of novel proteins using graph neural networks
A Strokach, D Becerra, C Corbi-Verge, A Perez-Riba, PM Kim
BioRxiv, 868935, 2019
202019
A multi-objective evolutionary algorithm for improving multiple sequence alignments
W Soto, D Becerra
Brazilian Symposium on Bioinformatics, 73-82, 2014
192014
A multi-objective optimization energy approach to predict the ligand conformation in a docking process
A Sandoval-Perez, D Becerra, D Vanegas, D Restrepo-Montoya, F Nino
Genetic Programming: 16th European Conference, EuroGP 2013, Vienna, Austria …, 2013
152013
Identification of Plasmodium vivax proteins with potential role in invasion using sequence redundancy reduction and profile hidden Markov models
D Restrepo-Montoya, D Becerra, JG Carvajal-Patiño, A Mongui, LF Niño, ...
PLoS One 6 (10), e25189, 2011
142011
Adherencia al control prenatal en la clínica de gestantes adolescentes del Hospital de Engativá de Bogotá (tesis)
C Villacis, D Becerra, L Negrete
Bogotá: Universidad Nacional de Colombia, 1-65, 2012
82012
An association rule based approach for biological sequence feature classification
D Becerra, D Vanegas, G Cantor, L Nino
2009 IEEE Congress on Evolutionary Computation, 3111-3118, 2009
82009
A parallel framework for multi-objective evolutionary optimization
D Dasgupta, D Becerra, A Banceanu, F Nino, J Simien
IEEE Congress on Evolutionary Computation, 1-8, 2010
72010
Un modelo de asignación de recursos a rutas en el sistema de transporte masivo TransMilenio
S Duarte, D Becerra, LF Niño
Revista Avances en Sistemas e Informática 5 (1), 163-171, 2008
72008
A Method to Calculate the Relative Binding Free Energy Differences of α-Helical Stapled Peptides
PA Valiente, D Becerra, PM Kim
The Journal of Organic Chemistry 85 (3), 1644-1651, 2020
62020
Computational generation of proteins with predetermined three-dimensional shapes using ProteinSolver
A Strokach, D Becerra, C Corbi-Verge, A Perez-Riba, PM Kim
STAR protocols 2 (2), 100505, 2021
52021
Fast and flexible coarse-grained prediction of protein folding routes using ensemble modeling and evolutionary sequence variation
D Becerra, A Butyaev, J Waldispühl
Bioinformatics 36 (5), 1420-1428, 2020
52020
An algorithm for constrained LCS
D Becerra, W Soto, L Nino, Y Pinzón
ACS/IEEE International Conference on Computer Systems and Applications …, 2010
52010
Obstetricia Integral Siglo XXI: Embarazo en la Adolescencia
A Parada, D Becerra, C Villacis
Universidad Nacional de Colombia, 2009
42009
Designing real novel proteins using deep graph neural networks
A Strokach, D Becerra, C Corbi-Verge, A Perez-Riba, PM Kim
bioRxiv, 868935, 2019
32019
A multiobjective optimization algorithm for the weighted LCS
D Becerra, J Mendivelso, Y Pinzón
Discrete Applied Mathematics 212, 37-47, 2016
22016
A Multiobjective Approach to the Weighted Longest Common Subsequence Problem.
D Becerra, J Mendivelso, YJ Pinzón
Stringology, 64-74, 2012
22012
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Articles 1–20