| SBROME: a scalable optimization and module matching framework for automated biosystems design L Huynh, A Tsoukalas, M Köppe, I Tagkopoulos ACS synthetic biology 2 (5), 263-273, 2013 | 55 | 2013 |
| TAD fusion score: discovery and ranking the contribution of deletions to genome structure L Huynh, F Hormozdiari Genome biology 20, 1-13, 2019 | 37 | 2019 |
| Automatic design of synthetic gene circuits through mixed integer non-linear programming L Huynh, J Kececioglu, M Köppe, I Tagkopoulos PloS one 7 (4), e35529, 2012 | 34 | 2012 |
| Optimal part and module selection for synthetic gene circuit design automation L Huynh, I Tagkopoulos ACS synthetic biology 3 (8), 556-564, 2014 | 27 | 2014 |
| A parts database with consensus parameter estimation for synthetic circuit design L Huynh, I Tagkopoulos ACS Synthetic Biology 5 (12), 1412-1420, 2016 | 16 | 2016 |
| Fast and accurate circuit design automation through hierarchical model switching L Huynh, I Tagkopoulos ACS Synthetic Biology 4 (8), 890-897, 2015 | 9 | 2015 |
| Population collapse and adaptive rescue during long‐term chemostat fermentation N Rai, L Huynh, M Kim, I Tagkopoulos Biotechnology and Bioengineering 116 (3), 693-703, 2019 | 8 | 2019 |
| Epigenetic reprogramming of a distal developmental enhancer cluster drives SOX2 overexpression in breast and lung adenocarcinoma LE Abatti, P Lado-Fernández, L Huynh, M Collado, MM Hoffman, ... Nucleic Acids Research 51 (19), 10109-10131, 2023 | 7 | 2023 |
| MAFSE: A model-based framework for software verification TT Quan, DLN Hoang, BT Nguyen, AN Nguyen, QD Tran, PH Nguyen, ... 2010 Fourth International Conference on Secure Software Integration and …, 2010 | 6 | 2010 |
| A framework for automatic verification of programing exercises TT Quan, PH Nguyen, TH Bui, LV Huynh, AT Do 2009 2nd IEEE International Conference on Computer Science and Information …, 2009 | 6 | 2009 |
| Inferring density-dependent population dynamics mechanisms through rate disambiguation for logistic birth-death processes L Huynh, JG Scott, PJ Thomas Journal of Mathematical Biology 86 (4), 50, 2023 | 4 | 2023 |
| Contribution of Structural Variation to Genome Structure: TAD Fusion Discovery and Ranking. L Huynh, F Hormozdiari RECOMB, 259-260, 2018 | 3 | 2018 |
| Combinatorial approach for complex disorder prediction: Case study of neurodevelopmental disorders L Huynh, F Hormozdiari Genetics 210 (4), 1483-1495, 2018 | 2 | 2018 |
| Automated Design of Synthetic Gene Circuits through Linear Approximation and Mixed Integer Optimization L Huynh, J Kececioglu, I Tagkopoulos Proceedings of the 3rd International Workshop on Bio-design Automation …, 2011 | 1 | 2011 |
| Optimizing module matching for synthetic gene circuit design automation L Huynh, I Tagkopoulos Proceedings of the 5rd International Workshop on Bio-design Automation, IWBDA 13, 0 | 1 | |
| LINE1 promotes nuclear compartmentalization to repress the 8-cell state in embryonic stem cells J Zhang, L Ataei, L Wu, K Mittal, L Huynh, S Sarajideen, MA Mazid, ... bioRxiv, 2024.09. 22.614332, 2024 | | 2024 |
| Ultra-Accurate Complex Disorder Prediction: Case Study of Neurodevelopmental Disorders. L Huynh, F Hormozdiari RECOMB, 377-378, 2017 | | 2017 |
| A computational framework for the automated design of synthetic genetic circuits LV Huynh University of California, Davis, 2016 | | 2016 |
| Parameter inference for gene circuit models L Huynh, N Rai, I Tagkopoulos 7th INTERNATIONAL WORKSHOP ON BIO-DESIGN AUTOMATION UNIVERSITY OF WASHINGTON …, 2015 | | 2015 |
| Automatic Design of Synthetic Gene Circuits through Mixed Integer Non-linear L Huynh, J Kececioglu, M Köppe, I Tagkopoulos | | 2012 |
