Maxwell W Libbrecht
Maxwell W Libbrecht
Assistant Professor, Computing Science, Simon Fraser University
Verified email at - Homepage
TitleCited byYear
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
A user’s guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS Biol 9 (4), e1001046, 2011
Machine learning applications in genetics and genomics
MW Libbrecht, WS Noble
Nature Reviews Genetics, 2015
Integrative annotation of chromatin elements from ENCODE data
MM Hoffman, J Ernst, SP Wilder, A Kundaje, RS Harris, M Libbrecht, ...
Nucleic acids research 41 (2), 827-841, 2012
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449, 2014
Ubiquitous heterogeneity and asymmetry of the chromatin environment at regulatory elements
A Kundaje, S Kyriazopoulou-Panagiotopoulou, M Libbrecht, CL Smith, ...
Genome research 22 (9), 1735-1747, 2012
Joint annotation of chromatin state and chromatin conformation reveals relationships among domain types and identifies domains of cell-type-specific expression
MW Libbrecht, F Ay, MM Hoffman, DM Gilbert, JA Bilmes, WS Noble
Genome Research 25, 544-557, 2015
Interferometric measurement of the resonant absorption and refractive index in rubidium gas
KG Libbrecht, MW Libbrecht
American journal of physics 74 (12), 1055-1060, 2006
Distinct epigenetic features of differentiation-regulated replication origins
OK Smith, RG Kim, H Fu, MM Martin, CM Lin, K Utani, Y Zhang, AB Marks, ...
Epigenetics & chromatin 9 (1), 18, 2016
Nucleotide sequence and DNaseI sensitivity are predictive of 3D chromatin architecture
J Schreiber, M Libbrecht, J Bilmes, W Noble
bioRxiv, 103614, 2018
PREDICTD parallel epigenomics data imputation with cloud-based tensor decomposition
TJ Durham, MW Libbrecht, JJ Howbert, J Bilmes, WS Noble
Nature communications 9 (1), 1402, 2018
Segway 2.0: Gaussian mixture models and minibatch training
RCW Chan, MW Libbrecht, EG Roberts, JA Bilmes, WS Noble, ...
Bioinformatics 34 (4), 669-671, 2017
A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types
MW Libbrecht, OL Rodriguez, Z Weng, JA Bilmes, MM Hoffman, ...
Genome biology 20 (1), 180, 2019
Choosing non‐redundant representative subsets of protein sequence data sets using submodular optimization
MW Libbrecht, JA Bilmes, WS Noble
Proteins: Structure, Function, and Bioinformatics 86 (4), 454-466, 2018
Choosing panels of genomics assays using submodular optimization
K Wei, MW Libbrecht, JA Bilmes, WS Noble
Genome biology 17 (1), 229, 2016
Entropic graph-based posterior regularization: Extended version
MW Libbrecht, MM Hoffman, JA Bilmes, WS Noble
Proceedings of the International Conference on Machine Learning, 2015
Continuous chromatin state feature annotation of the human epigenome
B Chen, NS Kenari, MW Libbrecht
bioRxiv, 473017, 2018
Eliminating redundancy among protein sequences using submodular optimization
MW Libbrecht, JA Bilmes, WS Noble
bioRxiv, 051201, 2016
Clustering reveals ubiquitous heterogeneity and asymmetry of genomic signals at functional elements.
A Kundaje, S Kyriazopoulou-Panagiotopoulou, MW Libbrecht, CL Smith, ...
TinyToCS 2, 2013
Using GO ontology to improve Connectivity Map connections
M Libbrecht, J Dudley
The system can't perform the operation now. Try again later.
Articles 1–20