Shibu Yooseph, Ph.D.
Title
Cited by
Cited by
Year
The sequence of the human genome
JC Venter, MD Adams, EW Myers, PW Li, RJ Mural, GG Sutton, HO Smith, ...
science 291 (5507), 1304-1351, 2001
182832001
Structure, function and diversity of the healthy human microbiome
Human Microbiome Project Consortium
nature 486 (7402), 207, 2012
72192012
The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific
DB Rusch, AL Halpern, G Sutton, KB Heidelberg, S Williamson, ...
PLoS biology 5 (3), e77, 2007
21402007
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
nature 486 (7402), 215, 2012
17572012
Exploring expression data: identification and analysis of coexpressed genes
LJ Heyer, S Kruglyak, S Yooseph
Genome research 9 (11), 1106-1115, 1999
13371999
Essential genes of a minimal bacterium
JI Glass, N Assad-Garcia, N Alperovich, S Yooseph, MR Lewis, M Maruf, ...
Proceedings of the National Academy of Sciences 103 (2), 425-430, 2006
9932006
The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families
S Yooseph, G Sutton, DB Rusch, AL Halpern, SJ Williamson, ...
PLoS biology 5 (3), e16, 2007
9442007
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
RM Bowers, NC Kyrpides, R Stepanauskas, M Harmon-Smith, D Doud, ...
Nature biotechnology 35 (8), 725-731, 2017
6442017
Diet and feeding pattern affect the diurnal dynamics of the gut microbiome
A Zarrinpar, A Chaix, S Yooseph, S Panda
Cell metabolism 20 (6), 1006-1017, 2014
4632014
Gut microbiome-based metagenomic signature for non-invasive detection of advanced fibrosis in human nonalcoholic fatty liver disease
R Loomba, V Seguritan, W Li, T Long, N Klitgord, A Bhatt, PS Dulai, ...
Cell metabolism 25 (5), 1054-1062. e5, 2017
4572017
A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome
RJ Mural, MD Adams, EW Myers, HO Smith, GLG Miklos, R Wides, ...
Science 296 (5573), 1661-1671, 2002
4472002
Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
CL Dupont, DB Rusch, S Yooseph, MJ Lombardo, RA Richter, R Valas, ...
The ISME journal 6 (6), 1186-1199, 2012
4302012
The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples
SJ Williamson, DB Rusch, S Yooseph, AL Halpern, KB Heidelberg, ...
PloS one 3 (1), e1456, 2008
3772008
Genomic and functional adaptation in surface ocean planktonic prokaryotes
S Yooseph, KH Nealson, DB Rusch, JP McCrow, CL Dupont, M Kim, ...
Nature 468 (7320), 60-66, 2010
2742010
Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle
X He, JS McLean, A Edlund, S Yooseph, AP Hall, SY Liu, PC Dorrestein, ...
Proceedings of the National Academy of Sciences 112 (1), 244-249, 2015
2682015
Analyses of the microbial diversity across the human microbiome
K Li, M Bihan, S Yooseph, BA Methe
PloS one 7 (6), e32118, 2012
2612012
Evaluation of 16S rDNA-based community profiling for human microbiome research
Jumpstart Consortium Human Microbiome Project Data Generation Working Group
PloS one 7 (6), e39315, 2012
2532012
Whole-genome shotgun assembly and comparison of human genome assemblies
S Istrail, GG Sutton, L Florea, AL Halpern, CM Mobarry, R Lippert, ...
Proceedings of the National Academy of Sciences 101 (7), 1916-1921, 2004
2502004
Haplotyping as perfect phylogeny: A direct approach
V Bafna, D Gusfield, G Lancia, S Yooseph
Journal of Computational Biology 10 (3-4), 323-340, 2003
1782003
Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum
JS McLean, MJ Lombardo, JH Badger, A Edlund, M Novotny, ...
Proceedings of the National Academy of Sciences 110 (26), E2390-E2399, 2013
1712013
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Articles 1–20