The developmental dynamics of the maize leaf transcriptome P Li, L Ponnala, N Gandotra, L Wang, Y Si, SL Tausta, TH Kebrom, ... Nature genetics 42 (12), 1060-1067, 2010 | 789 | 2010 |
A brassinosteroid transcriptional network revealed by genome‐wide identification of BESI target genes in Arabidopsis thaliana X Yu, L Li, J Zola, M Aluru, H Ye, A Foudree, H Guo, S Anderson, S Aluru, ... The Plant Journal 65 (4), 634-646, 2011 | 663 | 2011 |
Selective cooperation between fatty acid binding proteins and peroxisome proliferator-activated receptors in regulating transcription NS Tan, NS Shaw, N Vinckenbosch, P Liu, R Yasmin, B Desvergne, ... Molecular and cellular biology 22 (14), 5114-5127, 2002 | 606 | 2002 |
A comparison of statistical methods for detecting differentially expressed genes from RNA-seq data VM Kvam, P Liu, Y Si American journal of botany 99 (2), 248-256, 2012 | 348 | 2012 |
Comparative analyses of C4 and C3 photosynthesis in developing leaves of maize and rice L Wang, A Czedik-Eysenberg, RA Mertz, Y Si, T Tohge, A Nunes-Nesi, ... Nature biotechnology 32 (11), 1158-1165, 2014 | 266 | 2014 |
Transcriptome-wide changes in Chlamydomonas reinhardtii gene expression regulated by carbon dioxide and the CO2-concentrating mechanism regulator CIA5/CCM1 W Fang, Y Si, S Douglass, D Casero, SS Merchant, M Pellegrini, ... The Plant Cell 24 (5), 1876-1893, 2012 | 214 | 2012 |
A low-cost library construction protocol and data analysis pipeline for Illumina-based strand-specific multiplex RNA-seq L Wang, Y Si, LK Dedow, Y Shao, P Liu, TP Brutnell PLoS One 6 (10), e26426, 2011 | 183 | 2011 |
Model-based clustering for RNA-seq data Y Si, P Liu, P Li, TP Brutnell Bioinformatics 30 (2), 197-205, 2014 | 176 | 2014 |
Quick calculation for sample size while controlling false discovery rate with application to microarray analysis P Liu, JTG Hwang Bioinformatics 23 (6), 739-746, 2007 | 164 | 2007 |
Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection JE Koltes, E Fritz-Waters, CJ Eisley, I Choi, H Bao, A Kommadath, ... BMC genomics 16 (1), 1-13, 2015 | 106 | 2015 |
Sample size calculation for designing RNA-sequencing experiments R Bi, P Liu BMC Bioinformatics 17 (1), 146, 2016 | 103* | 2016 |
Spleen transcriptome response to infection with avian pathogenic Escherichia coli in broiler chickens EE Sandford, M Orr, E Balfanz, N Bowerman, X Li, H Zhou, TJ Johnson, ... BMC genomics 12 (1), 1-13, 2011 | 98 | 2011 |
Developmental dynamics of Kranz cell transcriptional specificity in maize leaf reveals early onset of C4-related processes SL Tausta, P Li, Y Si, N Gandotra, P Liu, Q Sun, TP Brutnell, T Nelson Journal of experimental botany 65 (13), 3543-3555, 2014 | 83 | 2014 |
Response to persistent ER stress in plants: a multiphasic process that transitions cells from prosurvival activities to cell death R Srivastava, Z Li, G Russo, J Tang, R Bi, U Muppirala, S Chudalayandi, ... The Plant Cell 30 (6), 1220-1242, 2018 | 78 | 2018 |
Impaired fitness and transmission of macrolide-resistant Campylobacter jejuni in its natural host T Luangtongkum, Z Shen, VW Seng, O Sahin, B Jeon, P Liu, Q Zhang Antimicrobial agents and chemotherapy 56 (3), 1300-1308, 2012 | 75 | 2012 |
A multi-treatment experimental system to examine photosynthetic differentiation in the maize leaf RJH Sawers, P Liu, K Anufrikova, JTG Hwang, TP Brutnell BMC genomics 8 (1), 1-13, 2007 | 71 | 2007 |
Multiple endoplasmic reticulum-to-nucleus signaling pathways coordinate phospholipid metabolism with gene expression by distinct mechanisms SA Jesch, P Liu, X Zhao, MT Wells, SA Henry Journal of Biological Chemistry 281 (33), 24070-24083, 2006 | 68 | 2006 |
Deregulation of maize C4 photosynthetic development in a mesophyll cell-defective mutant S Covshoff, W Majeran, P Liu, JM Kolkman, KJ van Wijk, TP Brutnell Plant Physiology 146 (4), 1469-1481, 2008 | 67 | 2008 |
Transcriptome response of cassava leaves under natural shade Z Ding, Y Zhang, Y Xiao, F Liu, M Wang, X Zhu, P Liu, Q Sun, W Wang, ... Scientific reports 6 (1), 1-14, 2016 | 59 | 2016 |
Transcriptome analysis of avian pathogenic Escherichia coli O1 in chicken serum reveals adaptive responses to systemic infection G Li, KA Tivendale, P Liu, Y Feng, Y Wannemuehler, W Cai, ... Infection and immunity 79 (5), 1951-1960, 2011 | 57 | 2011 |