T. Roderick Docking
T. Roderick Docking
Clinical Bioinformatics Coordinator, Canada's Michael Smith Genome Sciences Centre
Verified email at bcgsc.ca
TitleCited byYear
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
GigaScience 2 (1), 10, 2013
4472013
Assemblathon 1: a competitive assessment of de novo short read assembly methods
DA Earl, K Bradnam, JS John, A Darling, D Lin, J Faas, HOK Yu, B Vince, ...
Genome research, gr. 126599.111, 2011
4452011
Concurrent CIC mutations, IDH mutations and 1p/19q loss distinguish oligodendrogliomas from other cancers
S Yip, YS Butterfield, O Morozova, S Chittaranjan, MD Blough, J An, I Birol, ...
The Journal of Pathology, 0
218
De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data
S DiGuistini, NY Liao, D Platt, G Robertson, M Seidel, SK Chan, ...
Genome biology 10 (9), R94, 2009
1802009
Draft genome of the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major forest pest
CI Keeling, MMS Yuen, NY Liao, TR Docking, SK Chan, GA Taylor, ...
Genome biology 14 (3), R27, 2013
1562013
Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen
S DiGuistini, Y Wang, NY Liao, G Taylor, P Tanguay, N Feau, B Henrissat, ...
Proceedings of the National Academy of Sciences 108 (6), 2504, 2011
1542011
Transcriptome and full-length cDNA resources for the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major insect pest of pine forests
CI Keeling, H Henderson, M Li, M Yuen, EL Clark, JD Fraser, DPW Huber, ...
Insect biochemistry and molecular biology 42 (8), 525-536, 2012
732012
A regulatory toolbox of MiniPromoters to drive selective expression in the brain
E Portales-Casamar, DJ Swanson, L Liu, CN de Leeuw, KG Banks, ...
Proceedings of the National Academy of Sciences 107 (38), 16589-16594, 2010
562010
The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera
S Haridas, Y Wang, L Lim, SM Alamouti, S Jackman, R Docking, ...
BMC genomics 14 (1), 373, 2013
402013
Transcriptome resources and functional characterization of monoterpene synthases for two host species of the mountain pine beetle, lodgepole pine (Pinus contorta) and jack pine …
DE Hall, MMS Yuen, S Jancsik, AL Quesada, HK Dullat, M Li, ...
BMC plant biology 13 (1), 80, 2013
382013
Updated genome assembly and annotation of Paenibacillus larvae, the agent of American foulbrood disease of honey bees
QWT Chan, RS Cornman, I Birol, NY Liao, SK Chan, TR Docking, ...
Bmc Genomics 12 (1), 450, 2011
352011
A clinically validated diagnostic second-generation sequencing assay for detection of hereditary BRCA1 and BRCA2 mutations
IE Bosdet, TR Docking, YS Butterfield, AJ Mungall, T Zeng, RJ Coope, ...
The Journal of Molecular Diagnostics 15 (6), 796-809, 2013
262013
Retrotransposon sequence variation in four asexual plant species
TR Docking, FE Saade, MC Elliott, DJ Schoen
Journal of molecular evolution 62 (4), 375-387, 2006
252006
Gene discovery for the bark beetle-vectored fungal tree pathogen Grosmannia clavigera
U Hesse-Orce, S DiGuistini, CI Keeling, Y Wang, M Li, H Henderson, ...
BMC genomics 11 (1), 536, 2010
222010
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. Gigascience 2: 10
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
doi 10.1186/2047-217X-2-10, 2013
162013
Kleat: cleavage site analysis of transcriptomes
I Birol, A Raymond, R Chiu, KM Nip, SD Jackman, M Kreitzman, ...
Pacific Symposium on Biocomputing Co-Chairs, 347-358, 2014
132014
Large-scale gene network analysis reveals the significance of extracellular matrix pathway and homeobox genes in acute myeloid leukemia: an introduction to the Pigengene …
A Foroushani, R Agrahari, R Docking, L Chang, G Duns, M Hudoba, ...
BMC medical genomics 10 (1), 16, 2017
122017
Barnacle: detecting and characterizing tandem duplications and fusions in transcriptome assemblies
L Swanson, G Robertson, KL Mungall, YS Butterfield, R Chiu, RD Corbett, ...
BMC genomics 14 (1), 550, 2013
112013
Applications of Bayesian network models in predicting types of hematological malignancies
R Agrahari, A Foroushani, TR Docking, L Chang, G Duns, M Hudoba, ...
Scientific reports 8 (1), 6951, 2018
22018
Meis2 as a critical player in MN1-induced leukemia
CK Lai, GL Norddahl, T Maetzig, P Rosten, T Lohr, LS Milde, ...
Blood cancer journal 7 (9), e613, 2017
22017
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