Anthony Philippakis
Anthony Philippakis
Unknown affiliation
Verified email at google.com
Title
Cited by
Cited by
Year
A framework for variation discovery and genotyping using next-generation DNA sequencing data
MA DePristo, E Banks, R Poplin, KV Garimella, JR Maguire, C Hartl, ...
Nature genetics 43 (5), 491, 2011
83192011
Diversity and complexity in DNA recognition by transcription factors
G Badis, MF Berger, AA Philippakis, S Talukder, AR Gehrke, SA Jaeger, ...
Science 324 (5935), 1720-1723, 2009
9332009
Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities
MF Berger, AA Philippakis, AM Qureshi, FS He, PW Estep, ML Bulyk
Nature biotechnology 24 (11), 1429-1435, 2006
6512006
Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences
MF Berger, G Badis, AR Gehrke, S Talukder, AA Philippakis, ...
Cell 133 (7), 1266-1276, 2008
5892008
High-resolution DNA-binding specificity analysis of yeast transcription factors
C Zhu, KJRP Byers, RP McCord, Z Shi, MF Berger, DE Newburger, ...
Genome research 19 (4), 556-566, 2009
4342009
The Matchmaker Exchange: a platform for rare disease gene discovery
AA Philippakis, DR Azzariti, S Beltran, AJ Brookes, CA Brownstein, ...
Human mutation 36 (10), 915-921, 2015
2812015
A map of human genome variation from population-scale sequencing
GP Consortium
Nature 467 (7319), 1061-1073, 2010
1982010
Gain-of-function mutations in the mechanically activated ion channel PIEZO2 cause a subtype of Distal Arthrogryposis
B Coste, G Houge, MF Murray, N Stitziel, M Bandell, MA Giovanni, ...
Proceedings of the National Academy of Sciences 110 (12), 4667-4672, 2013
1662013
International cooperation to enable the diagnosis of all rare genetic diseases
KM Boycott, A Rath, JX Chong, T Hartley, FS Alkuraya, G Baynam, ...
The American Journal of Human Genetics 100 (5), 695-705, 2017
1642017
Systematic identification of mammalian regulatory motifs' target genes and functions
JB Warner, AA Philippakis, SA Jaeger, FS He, J Lin, ML Bulyk
Nature methods 5 (4), 347-353, 2008
1062008
Comparing strategies to fine-map the association of common SNPs at chromosome 9p21 with type 2 diabetes and myocardial infarction
J Shea, V Agarwala, AA Philippakis, J Maguire, E Banks, M DePristo, ...
Nature genetics 43 (8), 801-805, 2011
922011
A structural variation reference for medical and population genetics
RL Collins, H Brand, KJ Karczewski, X Zhao, J Alföldi, LC Francioli, ...
Nature 581 (7809), 444-451, 2020
822020
Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cells
AA Philippakis, BW Busser, SS Gisselbrecht, FS He, B Estrada, ...
PLoS Comput Biol 2 (5), e53, 2006
752006
Design of compact, universal DNA microarrays for protein binding microarray experiments
AA Philippakis, AM Qureshi, MF Berger, ML Bulyk
Journal of Computational Biology 15 (7), 655-665, 2008
612008
Consent codes: upholding standard data use conditions
SOM Dyke, AA Philippakis, J Rambla De Argila, DN Paltoo, ...
PLoS genetics 12 (1), e1005772, 2016
572016
MODULEFINDER: A TOOL FOR COMPUTATIONAL DISCOVERY OF CIS REGULATORY MODULES
AA Philippakis, FS He, ML Bulyk
Biocomputing 2005, 519-530, 2005
572005
An open resource of structural variation for medical and population genetics
RL Collins, H Brand, KJ Karczewski, X Zhao, J Alföldi, AV Khera, ...
BioRxiv, 578674, 2019
442019
Multi-step control of muscle diversity by Hox proteins in the Drosophila embryo
J Enriquez, H Boukhatmi, L Dubois, AA Philippakis, ML Bulyk, ...
Development 137 (3), 457-466, 2010
422010
Inferring condition‐specific transcription factor function from DNA binding and gene expression data
RP McCord, MF Berger, AA Philippakis, ML Bulyk
Molecular systems biology 3 (1), 100, 2007
402007
Acquisition, analysis, and sharing of data in 2015 and beyond: a survey of the landscape: a conference report from the American Heart Association Data Summit 2015
EM Antman, EJ Benjamin, RA Harrington, SR Houser, ED Peterson, ...
Journal of the American Heart Association 4 (11), e002810, 2015
362015
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