| Functional discovery via a compendium of expression profiles TR Hughes, MJ Marton, AR Jones, CJ Roberts, R Stoughton, CD Armour, ... Cell 102 (1), 109-126, 2000 | 3294 | 2000 |
| Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer TR Hughes, M Mao, AR Jones, J Burchard, MJ Marton, KW Shannon, ... Nature biotechnology 19 (4), 342-347, 2001 | 1657 | 2001 |
| Integrated genomic and proteomic analyses of gene expression in mammalian cells Q Tian, SB Stepaniants, M Mao, L Weng, MC Feetham, MJ Doyle, ... Molecular & Cellular Proteomics 3 (10), 960-969, 2004 | 960 | 2004 |
| Molecular dynamics study of unbinding of the avidin-biotin complex S Izrailev, S Stepaniants, M Balsera, Y Oono, K Schulten Biophysical journal 72 (4), 1568-1581, 1997 | 942 | 1997 |
| Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes PY Lum, CD Armour, SB Stepaniants, G Cavet, MK Wolf, JS Butler, ... Cell 116 (1), 121-137, 2004 | 575 | 2004 |
| Steered molecular dynamics S Izrailev, S Stepaniants, B Isralewitz, D Kosztin, H Lu, F Molnar, ... Computational Molecular Dynamics: Challenges, Methods, Ideas: Proceedings of …, 1999 | 559 | 1999 |
| Rosetta error model for gene expression analysis L Weng, H Dai, Y Zhan, Y He, SB Stepaniants, DE Bassett Bioinformatics 22 (9), 1111-1121, 2006 | 339 | 2006 |
| Reconstructing potential energy functions from simulated force-induced unbinding processes M Balsera, S Stepaniants, S Izrailev, Y Oono, K Schulten Biophysical journal 73 (3), 1281-1287, 1997 | 211 | 1997 |
| Gene expression profiling in patients with chronic obstructive pulmonary disease and lung cancer IM Wang, S Stepaniants, Y Boie, JR Mortimer, B Kennedy, M Elliott, ... American journal of respiratory and critical care medicine 177 (4), 402-411, 2008 | 200 | 2008 |
| Use of hybridization kinetics for differentiating specific from non‐specific binding to oligonucleotide microarrays H Dai, M Meyer, S Stepaniants, M Ziman, R Stoughton Nucleic Acids Research 30 (16), e86-e86, 2002 | 187 | 2002 |
| Individual-specific variation of gene expression in peripheral blood leukocytes JP Radich, M Mao, S Stepaniants, M Biery, J Castle, T Ward, ... Genomics 83 (6), 980-988, 2004 | 163 | 2004 |
| Systems analysis of eleven rodent disease models reveals an inflammatome signature and key drivers IM Wang, B Zhang, X Yang, J Zhu, S Stepaniants, C Zhang, Q Meng, ... Molecular systems biology 8 (1), 594, 2012 | 146 | 2012 |
| Signatures of environmental exposures using peripheral leukocyte gene expression: tobacco smoke JW Lampe, SB Stepaniants, M Mao, JP Radich, H Dai, PS Linsley, ... Cancer Epidemiology Biomarkers & Prevention 13 (3), 445-453, 2004 | 144 | 2004 |
| Pathway and gene-set activation measurement from mRNA expression data: the tissue distribution of human pathways DM Levine, DR Haynor, JC Castle, SB Stepaniants, M Pellegrini, M Mao, ... Genome biology 7, 1-17, 2006 | 111 | 2006 |
| Microarray standard data set and figures of merit for comparing data processing methods and experiment designs YD He, H Dai, EE Schadt, G Cavet, SW Edwards, SB Stepaniants, ... Bioinformatics 19 (8), 956-965, 2003 | 106 | 2003 |
| Selection of housekeeping genes for real-time PCR in atopic human bronchial epithelial cells JQ He, AJ Sandford, IM Wang, S Stepaniants, DA Knight, A Kicic, SM Stick, ... European Respiratory Journal 32 (3), 755-762, 2008 | 100 | 2008 |
| Computational Molecular Dynamics: Challenges, Methods S Izrailev, S Stepaniants, B Isralewitz, D Kosztin, H Lu, F Molnar, ... Ideas 4, 39, 1998 | 83 | 1998 |
| Extraction of lipids from phospholipid membranes by steered molecular dynamics S Stepaniants, S Izrailev, K Schulten Molecular modeling annual 3, 473-475, 1997 | 83 | 1997 |
| A gene expression signature that classifies human atherosclerotic plaque by relative inflammation status O Puig, J Yuan, S Stepaniants, R Zieba, E Zycband, M Morris, S Coulter, ... Circulation: Cardiovascular Genetics 4 (6), 595-604, 2011 | 70 | 2011 |
| Identification and validation of genes affecting aortic lesions in mice X Yang, L Peterson, R Thieringer, JL Deignan, X Wang, J Zhu, S Wang, ... The Journal of clinical investigation 120 (7), 2414-2422, 2010 | 68 | 2010 |
