Philip J Uren
Philip J Uren
Chief Technology Officer, Episona, Inc.
Verified email at episona.com
Title
Cited by
Cited by
Year
Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment
E Hodges, A Molaro, CO Dos Santos, P Thekkat, Q Song, PJ Uren, J Park, ...
Molecular cell 44 (1), 17-28, 2011
2612011
Site identification in high-throughput RNA–protein interaction data
PJ Uren, E Bahrami-Samani, SC Burns, M Qiao, FV Karginov, E Hodges, ...
Bioinformatics 28 (23), 3013-3020, 2012
1882012
Aberrant sperm DNA methylation predicts male fertility status and embryo quality
KI Aston, PJ Uren, TG Jenkins, A Horsager, BR Cairns, AD Smith, ...
Fertility and sterility 104 (6), 1388-1397. e5, 2015
1002015
WTAP is a novel oncogenic protein in acute myeloid leukemia
H Bansal, Q Yihua, SP Iyer, S Ganapathy, D Proia, LO Penalva, PJ Uren, ...
Leukemia 28 (5), 1171-1174, 2014
882014
Molecular hierarchy of mammary differentiation yields refined markers of mammary stem cells
CO dos Santos, C Rebbeck, E Rozhkova, A Valentine, A Samuels, ...
Proceedings of the National Academy of Sciences 110 (18), 7123-7130, 2013
772013
Genomic analyses of the RNA-binding protein Hu antigen R (HuR) identify a complex network of target genes and novel characteristics of its binding sites
PJ Uren, SC Burns, J Ruan, KK Singh, AD Smith, LOF Penalva
Journal of Biological Chemistry 286 (43), 37063-37066, 2011
752011
The RNA-binding protein Musashi1 affects medulloblastoma growth via a network of cancer-related genes and is an indicator of poor prognosis
DT Vo, D Subramaniam, M Remke, TL Burton, PJ Uren, JA Gelfond, ...
The American journal of pathology 181 (5), 1762-1772, 2012
472012
Riborex: fast and flexible identification of differential translation from Ribo-seq data
W Li, W Wang, PJ Uren, LOF Penalva, AD Smith
Bioinformatics 33 (11), 1735-1737, 2017
442017
Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells
S Tamim, DT Vo, PJ Uren, M Qiao, E Bindewald, WK Kasprzak, ...
PloS one 9 (1), e85591, 2014
342014
IGF2BP3 modulates the interaction of invasion-associated transcripts with RISC
H Ennajdaoui, JM Howard, T Sterne-Weiler, F Jahanbani, DJ Coyne, ...
Cell reports 15 (9), 1876-1883, 2016
312016
RNA-binding protein Musashi1 is a central regulator of adhesion pathways in glioblastoma
PJ Uren, DT Vo, PR de Araujo, R Pötschke, SC Burns, E Bahrami-Samani, ...
Molecular and cellular biology 35 (17), 2965-2978, 2015
292015
Leveraging cross-link modification events in CLIP-seq for motif discovery
E Bahrami-Samani, LOF Penalva, AD Smith, PJ Uren
Nucleic acids research 43 (1), 95-103, 2015
262015
High-throughput analyses of hnRNP H1 dissects its multi-functional aspect
PJ Uren, E Bahrami-Samani, PR de Araujo, C Vogel, M Qiao, SC Burns, ...
RNA biology 13 (4), 400-411, 2016
242016
A profile of transcriptomic changes in the rd10 mouse model of retinitis pigmentosa
PJ Uren, JT Lee, MM Doroudchi, AD Smith, A Horsager
Molecular vision 20, 1612, 2014
232014
Musashi1 impacts radio-resistance in glioblastoma by controlling DNA-protein kinase catalytic subunit
PR de Araujo, A Gorthi, AE da Silva, SS Tonapi, DT Vo, SC Burns, M Qiao, ...
The American journal of pathology 186 (9), 2271-2278, 2016
212016
RNA binding protein HuR regulates the expression of ABCA1
CM Ramírez, CS Lin, K Abdelmohsen, L Goedeke, JH Yoon, ...
Journal of lipid research 55 (6), 1066-1076, 2014
192014
A mouse model of targeted Musashi1 expression in whole intestinal epithelium suggests regulatory roles in cell cycle and stemness
FM Cambuli, BR Correa, A Rezza, SC Burns, M Qiao, PJ Uren, E Kress, ...
Stem cells 33 (12), 3621-3634, 2015
162015
Computational challenges, tools, and resources for analyzing co‐and post‐transcriptional events in high throughput
E Bahrami‐Samani, DT Vo, PR de Araujo, C Vogel, AD Smith, ...
Wiley Interdisciplinary Reviews: RNA 6 (3), 291-310, 2015
152015
Promoter prediction using physico-chemical properties of DNA
P Uren, RM Cameron-Jones, A Sale
International Symposium on Computational Life Science, 21-31, 2006
102006
Establishing a stable, repeatable platform for measuring changes in sperm DNA methylation
M Abbasi, AD Smith, H Swaminathan, P Sangngern, A Douglas, ...
Clinical epigenetics 10 (1), 1-12, 2018
32018
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