Aaron Quinlan
Aaron Quinlan
Professor of Human Genetics, University of Utah
Verified email at genetics.utah.edu - Homepage
TitleCited byYear
BEDTools: a flexible suite of utilities for comparing genomic features
AR Quinlan, IM Hall
Bioinformatics 26 (6), 841-842, 2010
A map of human genome variation from population-scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
BEDTools: the Swiss‐army tool for genome feature analysis
AR Quinlan
Current protocols in bioinformatics 47 (1), 11.12. 1-11.12. 34, 2014
Whole-genome sequencing and variant discovery in C. elegans
LDW Hillier, GT Marth, AR Quinlan, D Dooling, G Fewell, D Barnett, P Fox, ...
Nature methods 5 (2), 183, 2008
LUMPY: a probabilistic framework for structural variant discovery
RM Layer, C Chiang, AR Quinlan, IM Hall
Genome biology 15 (6), R84, 2014
Nanopore sequencing and assembly of a human genome with ultra-long reads
M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ...
Nature biotechnology 36 (4), 338, 2018
Demographic history and rare allele sharing among human populations
S Gravel, BM Henn, RN Gutenkunst, AR Indap, GT Marth, AG Clark, F Yu, ...
Proceedings of the National Academy of Sciences 108 (29), 11983-11988, 2011
Copy number variation detection and genotyping from exome sequence data
N Krumm, PH Sudmant, A Ko, BJ O'Roak, M Malig, BP Coe, AR Quinlan, ...
Genome research 22 (8), 1525-1532, 2012
Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus
W Yang, N Shen, DQ Ye, Q Liu, Y Zhang, XX Qian, N Hirankarn, D Ying, ...
PLoS genetics 6 (2), e1000841, 2010
BamTools: a C++ API and toolkit for analyzing and managing BAM files
DW Barnett, EK Garrison, AR Quinlan, MP Strömberg, GT Marth
Bioinformatics 27 (12), 1691-1692, 2011
Rapid whole-genome mutational profiling using next-generation sequencing technologies
DR Smith, AR Quinlan, HE Peckham, K Makowsky, W Tao, B Woolf, ...
Genome research 18 (10), 1638-1642, 2008
Poretools: a toolkit for analyzing nanopore sequence data
NJ Loman, AR Quinlan
Bioinformatics 30 (23), 3399-3401, 2014
Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers
S Onengut-Gumuscu, WM Chen, O Burren, NJ Cooper, AR Quinlan, ...
Nature genetics 47 (4), 381, 2015
Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome
AR Quinlan, RA Clark, S Sokolova, ML Leibowitz, Y Zhang, ME Hurles, ...
Genome research 20 (5), 623-635, 2010
Pyrobayes: an improved base caller for SNP discovery in pyrosequences
AR Quinlan, DA Stewart, MP Strömberg, GT Marth
Nature methods 5 (2), 179, 2008
GEMINI: integrative exploration of genetic variation and genome annotations
U Paila, BA Chapman, R Kirchner, AR Quinlan
PLoS computational biology 9 (7), e1003153, 2013
A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer
J Quick, AR Quinlan, NJ Loman
Gigascience 3 (1), 22, 2014
Whole-exome sequencing identifies rare and low-frequency coding variants associated with LDL cholesterol
LA Lange, Y Hu, H Zhang, C Xue, EM Schmidt, ZZ Tang, C Bizon, ...
The American Journal of Human Genetics 94 (2), 233-245, 2014
Pybedtools: a flexible Python library for manipulating genomic datasets and annotations
RK Dale, BS Pedersen, AR Quinlan
Bioinformatics 27 (24), 3423-3424, 2011
Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms
A Malhotra, M Lindberg, GG Faust, ML Leibowitz, RA Clark, RM Layer, ...
Genome research 23 (5), 762-776, 2013
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