Sayed-Amir Marashi
Sayed-Amir Marashi
Associate Professor of Bioinformatics, Department of Biotechnology, University of Tehran, Tehran
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Conformational study of human serum albumin in pre-denaturation temperatures by differential scanning calorimetry, circular dichroism and UV spectroscopy
M Rezaei-Tavirani, SH Moghaddamnia, B Ranjbar, M Amani, SA Marashi
Journal of Biochemistry and Molecular Biology 39 (5), 530-536, 2006
Impact of residue accessible surface area on the prediction of protein secondary structures
A Momen-Roknabadi, M Sadeghi, H Pezeshk, SA Marashi
BMC Bioinformatics 9 (1), 357, 2008
Binding of Tris to Bacillus licheniformis [alpha]-Amylase Can Affect Its Starch Hydrolysis Activity
Z Ghalanbor, N Ghaemi, SA Marashi, M Amanlou, M Habibi-Rezaei, ...
Protein and Peptide Letters 15 (2), 212-214, 2008
FFCA: a feasibility-based method for flux coupling analysis of metabolic networks
L David, SA Marashi, A Larhlimi, B Mieth, A Bockmayr
BMC Bioinformatics 12 (1), 236, 2011
Flux coupling analysis of metabolic networks is sensitive to missing reactions
SA Marashi, A Bockmayr
BioSystems 103 (1), 57-66, 2011
A metabolic network-based approach for developing feeding strategies for CHO cells to increase monoclonal antibody production
H Fouladiha, SA Marashi, F Torkashvand, F Mahboudi, NE Lewis, B Vaziri
Bioprocess and Biosystems Engineering 43, 1381-1389, 2020
Nanotechnology helps medicine: nanoscale swimmers and their future applications
Z Ghalanbor, SA Marashi, B Ranjbar
Medical Hypotheses 65 (1), 198-199, 2005
Biomedical applications of cell- and tissue-specific metabolic network models
H Fouladiha, SA Marashi
Journal of Biomedical Informatics 68, 35-49, 2017
A sperm-specific proteome-scale metabolic network model identifies non-glycolytic genes for energy deficiency in asthenozoospermia
A Asghari, SA Marashi, N Ansari-Pour
Systems Biology in Reproductive Medicine 63, 100-112, 2017
[beta]-Sheet capping: Signals that initiate and terminate [beta]-sheet formation
F FarzadFard, N Gharaei, H Pezeshk, SA Marashi
Journal of Structural Biology 161 (1), 101-110, 2008
Correlations between genomic GC levels and optimal growth temperatures are not 'robust'
SA Marashi, Z Ghalanbor
Biochemical and Biophysical Research Communications 325 (2), 381-383, 2004
Rps27a might act as a controller of microglia activation in triggering neurodegenerative diseases
N Khayer, M Mirzaie, SA Marashi, M Jalessi
PLOS ONE 15 (9), e0239219, 2020
A tale of two symmetrical tails: Structural and functional characteristics of palindromes in proteins
A Sheari, M Kargar, A Katanforoush, S Arab, M Sadeghi, H Pezeshk, ...
BMC Bioinformatics 9 (1), 274, 2008
A meta-analysis of gene expression data highlights synaptic dysfunction in the hippocampus of brains with Alzheimer’s disease
S Hosseinian, E Arefian, H Rakhsh-Khorshid, M Eivani, A Rezayof, ...
Scientific Reports 10, 8384, 2020
Impact of RNA structure on the prediction of donor and acceptor splice sites
SA Marashi, C Eslahchi, H Pezeshk, M Sadeghi
BMC Bioinformatics 7 (1), 297, 2006
Finding elementary flux modes in metabolic networks based on flux balance analysis and flux coupling analysis: application to the analysis of Escherichia coli metabolism
S Tabe-Bordbar, SA Marashi
Biotechnology Letters 35 (12), 2039-2044, 2013
A systems-based approach for cyanide overproduction by Bacillus megaterium for gold bioleaching enhancement
J Aminian-Dehkordi, SM Mousavi, SA Marashi, A Jafari, I Mijakovic
Frontiers in Bioengineering and Biotechnology 8, 528, 2020
Analysis of metabolic subnetworks by flux cone projection
SA Marashi, L David, A Bockmayr
Algorithms for Molecular Biology 7, 17, 2012
Reconstruction of a generic metabolic network model of cancer cells
M Hadi, SA Marashi
Molecular BioSystems 10 (11), 3014-3021, 2014
Manually curated genome-scale reconstruction of the metabolic network of Bacillus megaterium DSM319
J Aminian-Dehkordi, SM Mousavi, A Jafari, I Mijakovic, SA Marashi
Scientific Reports 9, 18762, 2019
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