Vivek K Mutalik
Vivek K Mutalik
Scientist, Berkeley National Lab, Berkeley CA, USA
Verified email at lbl.gov - Homepage
TitleCited byYear
Precise and reliable gene expression via standard transcription and translation initiation elements
VK Mutalik, JC Guimaraes, G Cambray, C Lam, MJ Christoffersen, QA Mai, ...
Nature methods 10 (4), 354, 2013
4602013
Composability of regulatory sequences controlling transcription and translation in Escherichia coli
S Kosuri, DB Goodman, G Cambray, VK Mutalik, Y Gao, AP Arkin, D Endy, ...
Proceedings of the National Academy of Sciences 110 (34), 14024-14029, 2013
2522013
Versatile RNA-sensing transcriptional regulators for engineering genetic networks
JB Lucks, L Qi, VK Mutalik, D Wang, AP Arkin
Proceedings of the National Academy of Sciences 108 (21), 8617-8622, 2011
2132011
Insights into transcriptional regulation and σ competition from an equilibrium model of RNA polymerase binding to DNA
IL Grigorova, NJ Phleger, VK Mutalik, CA Gross
Proceedings of the National Academy of Sciences 103 (14), 5332-5337, 2006
1632006
Quantitative estimation of activity and quality for collections of functional genetic elements
VK Mutalik, JC Guimaraes, G Cambray, QA Mai, MJ Christoffersen, ...
Nature methods 10 (4), 347, 2013
1592013
Rationally designed families of orthogonal RNA regulators of translation
VK Mutalik, L Qi, JC Guimaraes, JB Lucks, AP Arkin
Nature chemical biology 8 (5), 447, 2012
1502012
Measurement and modeling of intrinsic transcription terminators
G Cambray, JC Guimaraes, VK Mutalik, C Lam, QA Mai, T Thimmaiah, ...
Nucleic acids research 41 (9), 5139-5148, 2013
1312013
Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, σE
VA Rhodius, VK Mutalik
Proceedings of the National Academy of Sciences 107 (7), 2854-2859, 2010
1002010
Engineering naturally occurring trans -acting non-coding RNAs to sense molecular signals
L Qi, JB Lucks, CC Liu, VK Mutalik, AP Arkin
Nucleic acids research 40 (12), 5775-5786, 2012
822012
Rapid and Efficient One-Step Metabolic Pathway Integration in E. coli
MC Bassalo, AD Garst, AL Halweg-Edwards, WC Grau, DW Domaille, ...
ACS synthetic biology 5 (7), 561-568, 2016
742016
An adaptor from translational to transcriptional control enables predictable assembly of complex regulation
CC Liu, L Qi, JB Lucks, TH Segall-Shapiro, D Wang, VK Mutalik, AP Arkin
Nature methods 9 (11), 1088, 2012
632012
Promoter strength properties of the complete sigma E regulon of Escherichia coli and Salmonella enterica
VK Mutalik, G Nonaka, SE Ades, VA Rhodius, CA Gross
Journal of bacteriology 191 (23), 7279-7287, 2009
632009
Predicting the strength of UP-elements and full-length E. coli σE promoters
VA Rhodius, VK Mutalik, CA Gross
Nucleic acids research 40 (7), 2907-2924, 2011
592011
Tuning promoter strengths for improved synthesis and function of electron conduits in Escherichia coli
CP Goldbeck, HM Jensen, MA TerAvest, N Beedle, Y Appling, M Hepler, ...
ACS synthetic biology 2 (3), 150-159, 2013
522013
A steady state analysis indicates that negative feedback regulation of PTP1B by Akt elicits bistability in insulin-stimulated GLUT4 translocation
L Giri, VK Mutalik, KV Venkatesh
Theoretical Biology and Medical Modelling 1 (1), 2, 2004
482004
Toward rational design of bacterial genomes
G Cambray, VK Mutalik, AP Arkin
Current opinion in microbiology 14 (5), 624-630, 2011
362011
PR-PR: cross-platform laboratory automation system
G Linshiz, N Stawski, G Goyal, C Bi, S Poust, M Sharma, V Mutalik, ...
ACS synthetic biology 3 (8), 515-524, 2014
342014
Allosteric interactions and bifunctionality make the response of glutamine synthetase cascade system of Escherichia coli robust and ultrasensitive
VK Mutalik, P Shah, KV Venkatesh
Journal of Biological Chemistry 278 (29), 26327-26332, 2003
342003
Quantification of the glycogen cascade system: the ultrasensitive responses of liver glycogen synthase and muscle phosphorylase are due to distinctive regulatory designs
VK Mutalik, KV Venkatesh
Theoretical Biology and Medical Modelling 2 (1), 19, 2005
202005
Robust global sensitivity in multiple enzyme cascade system explains how the downstream cascade structure may remain unaffected by cross‐talk
VK Mutalik, AP Singh, JS Edwards, KV Venkatesh
FEBS letters 558 (1-3), 79-84, 2004
152004
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Articles 1–20