Silvia Rinaldi
Silvia Rinaldi
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Nano-biocomposite films with modified cellulose nanocrystals and synthesized silver nanoparticles
E Fortunati, S Rinaldi, M Peltzer, N Bloise, L Visai, I Armentano, ...
Carbohydrate polymers 101, 1122-1133, 2014
Allosteric modulators of HSP90 and HSP70: dynamics meets function through structure-based drug design
M Ferraro, I D’Annessa, E Moroni, G Morra, A Paladino, S Rinaldi, ...
Journal of medicinal chemistry 62 (1), 60-87, 2018
PLGA/Ag nanocomposites: in vitro degradation study and silver ion release
E Fortunati, L Latterini, S Rinaldi, JM Kenny, I Armentano
Journal of Materials Science: Materials in Medicine 22, 2735-2744, 2011
Comparison of the isomerization mechanisms of human melanopsin and invertebrate and vertebrate rhodopsins
S Rinaldi, F Melaccio, S Gozem, F Fanelli, M Olivucci
Proceedings of the National Academy of Sciences 111 (5), 1714-1719, 2014
Toward automatic rhodopsin modeling as a tool for high-throughput computational photobiology
F Melaccio, M del Carmen Marín, A Valentini, F Montisci, S Rinaldi, ...
Journal of Chemical Theory and Computation 12 (12), 6020-6034, 2016
Molecular bases for the selection of the chromophore of animal rhodopsins
HL Luk, F Melaccio, S Rinaldi, S Gozem, M Olivucci
Proceedings of the National Academy of Sciences 112 (50), 15297-15302, 2015
Learning from photobiology how to design molecular devices using a computer
S Gozem, F Melaccio, HL Luk, S Rinaldi, M Olivucci
Chemical Society Reviews 43 (12), 4019-4036, 2014
Disulfide bond mimetics: strategies and challenges
A Gori, P Gagni, S Rinaldi
Chemistry–A European Journal 23 (60), 14987-14995, 2017
Integrated PLGA–Ag nanocomposite systems to control the degradation rate and antibacterial properties
S Rinaldi, E Fortunati, M Taddei, JM Kenny, I Armentano, L Latterini
Journal of Applied Polymer Science 130 (2), 1185-1193, 2013
Origin of Fluorescence in 11-cis Locked Bovine Rhodopsin
EN Laricheva, S Gozem, S Rinaldi, F Melaccio, A Valentini, M Olivucci
Journal of Chemical Theory and Computation 8 (8), 2559-2563, 2012
Protein design: from computer models to artificial intelligence
A Paladino, F Marchetti, S Rinaldi, G Colombo
Wiley Interdisciplinary Reviews: Computational Molecular Science 7 (5), e1318, 2017
Understanding complex mechanisms of enzyme reactivity: the case of Limonene-1, 2-epoxide hydrolases
S Rinaldi, MW Van der Kamp, KE Ranaghan, AJ Mulholland, G Colombo
Acs Catalysis 8 (7), 5698-5707, 2018
A local allosteric network in heat shock protein 70 (Hsp70) links inhibitor binding to enzyme activity and distal protein–protein interactions
S Rinaldi, VA Assimon, ZT Young, G Morra, H Shao, IR Taylor, ...
ACS chemical biology 13 (11), 3142-3152, 2018
Machine learning of allosteric effects: the analysis of ligand-induced dynamics to predict functional effects in TRAP1
M Ferraro, E Moroni, E Ippoliti, S Rinaldi, C Sanchez-Martin, A Rasola, ...
The Journal of Physical Chemistry B 125 (1), 101-114, 2020
Tryptophan scanning mutagenesis as a way to mimic the compound-bound state and probe the selectivity of allosteric inhibitors in cells
IR Taylor, VA Assimon, SY Kuo, S Rinaldi, X Li, ZT Young, G Morra, ...
Chemical science 11 (7), 1892-1904, 2020
Biodegradable PLGA matrix nanocomposite with silver nanoparticles: material properties and bacteria activity
I Armentano, E Fortunati, L Latterini, S Rinaldi, E Saino, L Visai, F Elisei, ...
Journal of Nanostructured Polymers and Nanocomposites 6 (4), 110-117, 2010
Setup and validation of a reliable docking protocol for the development of neuroprotective agents by targeting the Sigma-1 Receptor (S1R)
G Rossino, M Rui, L Pozzetti, D Schepmann, B Wünsch, D Zampieri, ...
International Journal of Molecular Sciences 21 (20), 7708, 2020
Mechanistic model for the Hsp90-driven opening of human Argonaute
S Rinaldi, G Colombo, A Paladino
Journal of Chemical Information and Modeling 60 (3), 1469-1480, 2020
The dynamics of t1 adenosine binding on human Argonaute 2: Understanding recognition with conformational selection
S Rinaldi, G Colombo, A Paladino
Protein Science 31 (8), e4377, 2022
Unraveling energy and dynamics determinants to interpret protein functional plasticity: the limonene-1, 2-epoxide-hydrolase case study
S Rinaldi, A Gori, C Annovazzi, EE Ferrandi, D Monti, G Colombo
Journal of Chemical Information and Modeling 57 (4), 717-725, 2017
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