| STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets D Szklarczyk, AL Gable, D Lyon, A Junge, S Wyder, J Huerta-Cepas, ... Nucleic acids research 47 (D1), D607-D613, 2019 | 12846 | 2019 |
| The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible D Szklarczyk, JH Morris, H Cook, M Kuhn, S Wyder, M Simonovic, ... Nucleic acids research, gkw937, 2016 | 6553 | 2016 |
| The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets D Szklarczyk, AL Gable, KC Nastou, D Lyon, R Kirsch, S Pyysalo, ... Nucleic Acids Research 49 (D1), D605-D612, 2021 | 4280 | 2021 |
| Cytoscape stringApp: Network analysis and visualization of proteomics data NT Doncheva, JH Morris, J Gorodkin, LJ Jensen Journal of proteome research 18 (2), 623-632, 2018 | 1274 | 2018 |
| Topological analysis and interactive visualization of biological networks and protein structures NT Doncheva, Y Assenov, FS Domingues, M Albrecht Nature protocols 7 (4), 670-685, 2012 | 495 | 2012 |
| The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest D Szklarczyk, R Kirsch, M Koutrouli, K Nastou, F Mehryary, R Hachilif, ... Nucleic Acids Research 51 (D1), D638-D646, 2023 | 459 | 2023 |
| Dense genotyping of immune-related disease regions identifies nine new risk loci for primary sclerosing cholangitis JZ Liu, JR Hov, T Folseraas, E Ellinghaus, SM Rushbrook, NT Doncheva, ... Nature genetics 45 (6), 670-675, 2013 | 414 | 2013 |
| Analyzing and visualizing residue networks of protein structures NT Doncheva, K Klein, FS Domingues, M Albrecht Trends in biochemical sciences 36 (4), 179-182, 2011 | 265 | 2011 |
| Association between variants of PRDM1 and NDP52 and Crohn's disease, based on exome sequencing and functional studies D Ellinghaus, H Zhang, S Zeissig, S Lipinski, A Till, T Jiang, B Stade, ... Gastroenterology 145 (2), 339-347, 2013 | 168 | 2013 |
| Viruses. STRING: A virus-host protein-protein interaction database H Cook, N Doncheva, D Szklarczyk, C von Mering, L Jensen Viruses 10 (10), 519, 2018 | 113 | 2018 |
| Correction to ‘The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets’ D Szklarczyk, AL Gable, KC Nastou, D Lyon, R Kirsch, S Pyysalo, ... Nucleic Acids Research 49 (18), 10800, 2021 | 91 | 2021 |
| Recent approaches to the prioritization of candidate disease genes NT Doncheva, T Kacprowski, M Albrecht Wiley Interdisciplinary Reviews: Systems Biology and Medicine 4 (5), 429-442, 2012 | 73 | 2012 |
| Visualize omics data on networks with Omics Visualizer, a Cytoscape App M Legeay, NT Doncheva, JH Morris, LJ Jensen F1000Research 9, 2020 | 61 | 2020 |
| NetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules T Kacprowski, NT Doncheva, M Albrecht Bioinformatics 29 (11), 1471-1473, 2013 | 49 | 2013 |
| Abundant Genetic Overlap between Blood Lipids and Immune-Mediated Diseases Indicates Shared Molecular Genetic Mechanisms OA Andreassen, RS Desikan, Y Wang, WK Thompson, AJ Schork, ... PLoS ONE 10 (4), 2015 | 47 | 2015 |
| Profiling of Parkin-binding partners using tandem affinity purification A Zanon, A Rakovic, H Blankenburg, NT Doncheva, C Schwienbacher, ... PLoS ONE 8 (11), e78648, 2013 | 44 | 2013 |
| Human pathways in animal models: possibilities and limitations NT Doncheva, O Palasca, R Yarani, T Litman, C Anthon, MAM Groenen, ... Nucleic Acids Research 49 (4), 1859-1871, 2021 | 34 | 2021 |
| Consistent prediction of mutation effect on drug binding in HIV-1 protease using alchemical calculations T Bastys, V Gapsys, NT Doncheva, R Kaiser, BL de Groot, OV Kalinina Journal of chemical theory and computation 14 (7), 3397-3408, 2018 | 22 | 2018 |
| Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3 A Chandrasekaran, KS Dittlau, GI Corsi, H Haukedal, NT Doncheva, ... Stem cell reports 16 (11), 2736-2751, 2021 | 19 | 2021 |
| Cytoscape stringApp 2.0: analysis and visualization of heterogeneous biological networks NT Doncheva, JH Morris, H Holze, R Kirsch, KC Nastou, Y Cuesta-Astroz, ... Journal of Proteome Research 22 (2), 637-646, 2022 | 15 | 2022 |
Lars Juhl JensenUniversity of CopenhagenVerified email at cpr.ku.dk
