Zabrina Brumme
Zabrina Brumme
Associate Professor, Faculty of Health Sciences, Simon Fraser University
Verified email at sfu.ca - Homepage
Title
Cited by
Cited by
Year
Changes in mitochondrial DNA as a marker of nucleoside toxicity in HIV-infected patients
HCF Cote, ZL Brumme, KJP Craib, CS Alexander, B Wynhoven, L Ting, ...
New England Journal of Medicine 346 (11), 811-820, 2002
6772002
Predictors of HIV drug-resistance mutations in a large antiretroviral-naive cohort initiating triple antiretroviral therapy
PR Harrigan, RS Hogg, WWY Dong, B Yip, B Wynhoven, J Woodward, ...
The Journal of infectious diseases 191 (3), 339-347, 2005
5092005
Adaptation of HIV-1 to human leukocyte antigen class I
Y Kawashima, K Pfafferott, J Frater, P Matthews, R Payne, M Addo, ...
Nature 458 (7238), 641-645, 2009
5032009
Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection
MR Henn, CL Boutwell, P Charlebois, NJ Lennon, KA Power, ...
PLoS Pathog 8 (3), e1002529, 2012
3482012
Molecular and clinical epidemiology of CXCR4-using HIV-1 in a large population of antiretroviral-naive individuals
ZL Brumme, J Goodrich, HB Mayer, CJ Brumme, BM Henrick, ...
The Journal of infectious diseases 192 (3), 466-474, 2005
3312005
HLA-B57/B* 5801 human immunodeficiency virus type 1 elite controllers select for rare gag variants associated with reduced viral replication capacity and strong cytotoxic T …
T Miura, MA Brockman, A Schneidewind, M Lobritz, F Pereyra, A Rathod, ...
Journal of virology 83 (6), 2743-2755, 2009
2942009
Influence of HLA-C expression level on HIV control
R Apps, Y Qi, JM Carlson, H Chen, X Gao, R Thomas, Y Yuki, ...
Science 340 (6128), 87-91, 2013
2902013
Antigen load and viral sequence diversification determine the functional profile of HIV-1–specific CD8+ T cells
H Streeck, ZL Brumme, M Anastario, KW Cohen, JS Jolin, A Meier, ...
PLoS Med 5 (5), e100, 2008
2572008
TCR clonotypes modulate the protective effect of HLA class I molecules in HIV-1 infection
H Chen, ZM Ndhlovu, D Liu, LC Porter, JW Fang, S Darko, MA Brockman, ...
Nature immunology 13 (7), 691, 2012
2232012
Geographic and temporal trends in the molecular epidemiology and genetic mechanisms of transmitted HIV-1 drug resistance: an individual-patient-and sequence-level meta-analysis
SY Rhee, JL Blanco, MR Jordan, J Taylor, P Lemey, V Varghese, ...
PLoS Med 12 (4), e1001810, 2015
2222015
Marked epitope-and allele-specific differences in rates of mutation in human immunodeficiency type 1 (HIV-1) Gag, Pol, and Nef cytotoxic T-lymphocyte epitopes in acute/early …
ZL Brumme, CJ Brumme, J Carlson, H Streeck, M John, Q Eichbaum, ...
Journal of virology 82 (18), 9216-9227, 2008
1962008
Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1
ZL Brumme, CJ Brumme, D Heckerman, BT Korber, M Daniels, J Carlson, ...
PLoS pathogens 3 (7), e94, 2007
1952007
HLA-associated immune escape pathways in HIV-1 subtype B Gag, Pol and Nef proteins
ZL Brumme, M John, JM Carlson, CJ Brumme, D Chan, MA Brockman, ...
PloS one 4 (8), e6687, 2009
1802009
Human immunodeficiency virus type 1 protease cleavage site mutations associated with protease inhibitor cross-resistance selected by indinavir, ritonavir, and/or saquinavir
HCF Côté, ZL Brumme, PR Harrigan
Journal of virology 75 (2), 589-594, 2001
1632001
Definition of the viral targets of protective HIV-1-specific T cell responses
B Mothe, A Llano, J Ibarrondo, M Daniels, C Miranda, J Zamarreño, ...
Journal of translational medicine 9 (1), 208, 2011
1512011
HLA-associated alterations in replication capacity of chimeric NL4-3 viruses carrying gag-protease from elite controllers of human immunodeficiency virus type 1
T Miura, MA Brockman, ZL Brumme, CJ Brumme, F Pereyra, A Trocha, ...
Journal of virology 83 (1), 140-149, 2009
1512009
Phylogenetic dependency networks: inferring patterns of CTL escape and codon covariation in HIV-1 Gag
JM Carlson, ZL Brumme, CM Rousseau, CJ Brumme, P Matthews, ...
PLoS Comput Biol 4 (11), e1000225, 2008
1462008
Genetic characterization of human immunodeficiency virus type 1 in elite controllers: lack of gross genetic defects or common amino acid changes
T Miura, MA Brockman, CJ Brumme, ZL Brumme, JM Carlson, F Pereyra, ...
Journal of virology 82 (17), 8422-8430, 2008
1442008
Early selection in Gag by protective HLA alleles contributes to reduced HIV-1 replication capacity that may be largely compensated for in chronic infection
MA Brockman, ZL Brumme, CJ Brumme, T Miura, J Sela, PC Rosato, ...
Journal of virology 84 (22), 11937-11949, 2010
1412010
Impaired replication capacity of acute/early viruses in persons who become HIV controllers
T Miura, ZL Brumme, MA Brockman, P Rosato, J Sela, CJ Brumme, ...
Journal of virology 84 (15), 7581-7591, 2010
1332010
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