| Clonal expansion of genome-intact HIV-1 in functionally polarized Th1 CD4+ T cells GQ Lee, N Orlova-Fink, K Einkauf, FZ Chowdhury, X Sun, S Harrington, ... The Journal of clinical investigation 127 (7), 2689-2696, 2017 | 282 | 2017 |
| Intact HIV-1 proviruses accumulate at distinct chromosomal positions during prolonged antiretroviral therapy KB Einkauf, GQ Lee, C Gao, R Sharaf, X Sun, S Hua, SMY Chen, C Jiang, ... The Journal of clinical investigation 129 (3), 988-998, 2019 | 243 | 2019 |
| Convergence of Ser/Thr and two-component signaling to coordinate expression of the dormancy regulon in Mycobacterium tuberculosis*[S] JD Chao, KG Papavinasasundaram, X Zheng, A Chávez-Steenbock, ... Journal of biological chemistry 285 (38), 29239-29246, 2010 | 126 | 2010 |
| Anti-apoptotic protein BIRC5 maintains survival of HIV-1-infected CD4+ T cells HH Kuo, R Ahmad, GQ Lee, C Gao, HR Chen, Z Ouyang, MJ Szucs, ... Immunity 48 (6), 1183-1194. e5, 2018 | 120 | 2018 |
| Effect of analytical treatment interruption and reinitiation of antiretroviral therapy on HIV reservoirs and immunologic parameters in infected individuals KE Clarridge, J Blazkova, K Einkauf, M Petrone, EW Refsland, ... PLoS pathogens 14 (1), e1006792, 2018 | 93 | 2018 |
| Ability of HIV-1 Nef to downregulate CD4 and HLA class I differs among viral subtypes JK Mann, H Byakwaga, XT Kuang, AQ Le, CJ Brumme, P Mwimanzi, ... Retrovirology 10, 1-16, 2013 | 87 | 2013 |
| HIV-1 proviral landscapes distinguish posttreatment controllers from noncontrollers R Sharaf, GQ Lee, X Sun, B Etemad, LM Aboukhater, Z Hu, ZL Brumme, ... The Journal of clinical investigation 128 (9), 4074-4085, 2018 | 81 | 2018 |
| Diversity of HIV-1 reservoirs in CD4+ T-cell subpopulations GQ Lee, M Lichterfeld Current Opinion in HIV and AIDS 11 (4), 383-387, 2016 | 78 | 2016 |
| HIV-1 diversity considerations in the application of the Intact Proviral DNA Assay (IPDA) NN Kinloch, Y Ren, WD Conce Alberto, W Dong, P Khadka, SH Huang, ... Nature communications 12 (1), 165, 2021 | 71* | 2021 |
| Extensive virologic and immunologic characterization in an HIV-infected individual following allogeneic stem cell transplant and analytic cessation of antiretroviral therapy: A … NW Cummins, S Rizza, MR Litzow, S Hua, GQ Lee, K Einkauf, TW Chun, ... PLoS medicine 14 (11), e1002461, 2017 | 65 | 2017 |
| HIV drug resistance testing by high-multiplex “wide” sequencing on the MiSeq instrument HR Lapointe, W Dong, GQ Lee, DR Bangsberg, JN Martin, AR Mocello, ... Antimicrobial agents and chemotherapy 59 (11), 6824-6833, 2015 | 63 | 2015 |
| HIV-1 DNA sequence diversity and evolution during acute subtype C infection GQ Lee, K Reddy, KB Einkauf, K Gounder, JM Chevalier, KL Dong, ... Nature communications 10 (1), 2737, 2019 | 58 | 2019 |
| Reliable genotypic tropism tests for the major HIV-1 subtypes K Cashin, LR Gray, KL Harvey, D Perez-Bercoff, GQ Lee, J Sterjovski, ... Scientific reports 5 (1), 8543, 2015 | 51 | 2015 |
| Subtype-specific differences in Gag-protease-driven replication capacity are consistent with intersubtype differences in HIV-1 disease progression MW Kiguoya, JK Mann, D Chopera, K Gounder, GQ Lee, PW Hunt, ... Journal of virology 91 (13), 10.1128/jvi. 00253-17, 2017 | 40 | 2017 |
| HIV-specific T cell responses reflect substantive in vivo interactions with antigen despite long-term therapy EM Stevenson, AR Ward, R Truong, AS Thomas, SH Huang, TR Dilling, ... JCI insight 6 (3), 2021 | 39 | 2021 |
| Prevalence and virologic consequences of transmitted HIV-1 drug resistance in Uganda GQ Lee, DR Bangsberg, C Muzoora, Y Boum, JH Oyugi, N Emenyonu, ... AIDS research and human retroviruses 30 (9), 896-906, 2014 | 36 | 2014 |
| Tissue memory CD4+ T cells expressing IL-7 receptor-alpha (CD127) preferentially support latent HIV-1 infection F Hsiao, J Frouard, A Gramatica, G Xie, S Telwatte, GQ Lee, ... PLoS pathogens 16 (4), e1008450, 2020 | 35 | 2020 |
| Prolonged and substantial discordance in prevalence of raltegravir-resistant HIV-1 in plasma versus PBMC samples revealed by 454 “deep” sequencing GQ Lee, LC Swenson, AFY Poon, JN Martin, H Hatano, SG Deeks, ... Public Library of Science 7 (9), e46181, 2012 | 32 | 2012 |
| Theoretical and experimental assessment of degenerate primer tagging in ultra-deep applications of next-generation sequencing RH Liang, T Mo, W Dong, GQ Lee, LC Swenson, RM McCloskey, ... Nucleic Acids Research 42 (12), e98-e98, 2014 | 31 | 2014 |
| Prevalence and clinical impacts of HIV-1 intersubtype recombinants in Uganda revealed by near-full-genome population and deep sequencing approaches GQ Lee, DR Bangsberg, T Mo, C Lachowski, CJ Brumme, W Zhang, ... Aids 31 (17), 2345-2354, 2017 | 28 | 2017 |
