|Clonal expansion of genome-intact HIV-1 in functionally polarized Th1 CD4+ T cells|
GQ Lee, N Orlova-Fink, K Einkauf, FZ Chowdhury, X Sun, S Harrington, ...
The Journal of clinical investigation 127 (7), 2689-2696, 2017
|Convergence of Ser/Thr and two-component signaling to coordinate expression of the dormancy regulon in Mycobacterium tuberculosis|
JD Chao, KG Papavinasasundaram, X Zheng, A Chávez-Steenbock, ...
Journal of Biological Chemistry 285 (38), 29239-29246, 2010
|Intact HIV-1 proviruses accumulate at distinct chromosomal positions during prolonged antiretroviral therapy|
KB Einkauf, GQ Lee, C Gao, R Sharaf, X Sun, S Hua, SMY Chen, C Jiang, ...
The Journal of clinical investigation 129 (3), 988-998, 2019
|Ability of HIV-1 Nef to downregulate CD4 and HLA class I differs among viral subtypes|
JK Mann, H Byakwaga, XT Kuang, AQ Le, CJ Brumme, P Mwimanzi, ...
Retrovirology 10 (1), 100, 2013
|Effect of analytical treatment interruption and reinitiation of antiretroviral therapy on HIV reservoirs and immunologic parameters in infected individuals|
KE Clarridge, J Blazkova, K Einkauf, M Petrone, EW Refsland, ...
PLoS pathogens 14 (1), e1006792, 2018
|Diversity of HIV-1 reservoirs in CD4 T cell subsets|
GQ Lee, M Lichterfeld
Current Opinion in HIV and AIDS 11 (4), 383, 2016
|Anti-apoptotic protein BIRC5 maintains survival of HIV-1-infected CD4+ T cells|
HH Kuo, R Ahmad, GQ Lee, C Gao, HR Chen, Z Ouyang, MJ Szucs, ...
Immunity 48 (6), 1183-1194. e5, 2018
|HIV drug resistance testing by high-multiplex “wide” sequencing on the MiSeq instrument|
HR Lapointe, W Dong, GQ Lee, DR Bangsberg, JN Martin, AR Mocello, ...
Antimicrobial agents and chemotherapy 59 (11), 6824-6833, 2015
|Reliable genotypic tropism tests for the major HIV-1 subtypes|
K Cashin, LR Gray, KL Harvey, D Perez-Bercoff, GQ Lee, J Sterjovski, ...
Scientific reports 5, 8543, 2015
|Extensive virologic and immunologic characterization in an HIV-infected individual following allogeneic stem cell transplant and analytic cessation of antiretroviral therapy: A …|
NW Cummins, S Rizza, MR Litzow, S Hua, GQ Lee, K Einkauf, TW Chun, ...
PLoS medicine 14 (11), e1002461, 2017
|HIV-1 proviral landscapes distinguish posttreatment controllers from noncontrollers|
R Sharaf, GQ Lee, X Sun, B Etemad, LM Aboukhater, Z Hu, ZL Brumme, ...
The Journal of clinical investigation 128 (9), 4074-4085, 2018
|Prevalence and virologic consequences of transmitted HIV-1 drug resistance in Uganda|
GQ Lee, DR Bangsberg, C Muzoora, Y Boum, JH Oyugi, N Emenyonu, ...
AIDS research and human retroviruses 30 (9), 896-906, 2014
|Theoretical and experimental assessment of degenerate primer tagging in ultra-deep applications of next-generation sequencing|
RH Liang, T Mo, W Dong, GQ Lee, LC Swenson, RM McCloskey, ...
Nucleic acids research 42 (12), e98-e98, 2014
|Subtype-specific differences in Gag-protease-driven replication capacity are consistent with intersubtype differences in HIV-1 disease progression|
MW Kiguoya, JK Mann, D Chopera, K Gounder, GQ Lee, PW Hunt, ...
Journal of virology 91 (13), 2017
|Highly frequent HIV-1 minority resistant variants at baseline of the ANRS 139 TRIO trial had a limited impact on virological response|
C Charpentier, GQ Lee, C Rodriguez, B Visseaux, A Storto, C Fagard, ...
Journal of Antimicrobial Chemotherapy 70 (7), 2090-2096, 2015
|Prolonged and substantial discordance in prevalence of raltegravir-resistant HIV-1 in plasma versus PBMC samples revealed by 454 “deep” sequencing|
GQ Lee, LC Swenson, AFY Poon, JN Martin, H Hatano, SG Deeks, ...
PloS one 7 (9), e46181, 2012
|Comparison of population and 454 “deep” sequence analysis for HIV type 1 tropism versus the original trofile assay in non-B subtypes|
GQ Lee, PR Harrigan, W Dong, AFY Poon, J Heera, J Demarest, ...
AIDS research and human retroviruses 29 (6), 979-984, 2013
|HIV-1 DNA sequence diversity and evolution during acute subtype C infection|
GQ Lee, K Reddy, KB Einkauf, K Gounder, JM Chevalier, KL Dong, ...
Nature communications 10 (1), 1-11, 2019
|Prevalence and clinical impacts of HIV-1 intersubtype recombinants in Uganda revealed by near-full-genome population and deep sequencing approaches|
GQ Lee, DR Bangsberg, T Mo, C Lachowski, CJ Brumme, W Zhang, ...
AIDS (London, England) 31 (17), 2345, 2017
|Limited evolution of inferred HIV-1 tropism while viremia is undetectable during standard HAART therapy|
GQ Lee, W Dong, T Mo, DJHF Knapp, CJ Brumme, CK Woods, S Kanters, ...
PloS one 9 (6), e99000, 2014