Anthony Peter Fejes
Anthony Peter Fejes
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Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing
RD Morin, M Bainbridge, A Fejes, M Hirst, M Krzywinski, TJ Pugh, ...
Biotechniques 45 (1), 81-94, 2008
Recurrent somatic DICER1 mutations in nonepithelial ovarian cancers
A Heravi-Moussavi, MS Anglesio, SWG Cheng, J Senz, W Yang, ...
New England Journal of Medicine 366 (3), 234-242, 2012
FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology
AP Fejes, G Robertson, M Bilenky, R Varhol, M Bainbridge, SJM Jones
Bioinformatics 24 (15), 1729-1730, 2008
Genome-wide relationship between histone H3 lysine 4 mono-and tri-methylation and transcription factor binding
AG Robertson, M Bilenky, A Tam, Y Zhao, T Zeng, N Thiessen, T Cezard, ...
Genome research 18 (12), 1906-1917, 2008
Mutations in EZH2 cause Weaver syndrome
WT Gibson, RL Hood, SH Zhan, DE Bulman, AP Fejes, R Moore, ...
The American Journal of Human Genetics 90 (1), 110-118, 2012
Evolution of an adenocarcinoma in response to selection by targeted kinase inhibitors
SJM Jones, J Laskin, YY Li, OL Griffith, J An, M Bilenky, YS Butterfield, ...
Genome biology 11 (8), R82, 2010
A new algorithm for RNA secondary structure design
M Andronescu, AP Fejes, F Hutter, HH Hoos, A Condon
Journal of molecular biology 336 (3), 607-624, 2004
Recurrent targets of aberrant somatic hypermutation in lymphoma
AH Khodabakhshi, RD Morin, AP Fejes, AJ Mungall, KL Mungall, ...
Oncotarget 3 (11), 1308, 2012
De novo motif identification improves the accuracy of predicting transcription factor binding sites in ChIP-Seq data analysis
V Boeva, D Surdez, N Guillon, F Tirode, AP Fejes, O Delattre, E Barillot
Nucleic acids research 38 (11), e126-e126, 2010
GPSM2 mutations cause the brain malformations and hearing loss in Chudley-McCullough syndrome
D Doherty, AE Chudley, G Coghlan, GE Ishak, AM Innes, EG Lemire, ...
The American Journal of Human Genetics 90 (6), 1088-1093, 2012
DNA methylation, genotype and gene expression: who is driving and who is along for the ride?
MJ Jones, AP Fejes, MS Kobor
Genome biology 14 (7), 126, 2013
Gene expression profiling of oxidative stress response of C. elegans aging defective AMPK mutants using massively parallel transcriptome sequencing
H Shin, H Lee, AP Fejes, DL Baillie, HS Koo, SJM Jones
BMC research notes 4 (1), 34, 2011
System and method for simulating the time-dependent behaviour of atomic and/or molecular systems subject to static or dynamic fields
AP Fejes, JS Vieceli, S Rahnama, G Swaminathan
US Patent App. 11/581,075, 2008
System and method for modeling interactions
AP Fejes, G Swaminathan, JS Vieceli
US Patent 7,769,573, 2010
Shotgun proteomic analysis of a chromatophore-enriched preparation from the purple phototrophic bacterium Rhodopseudomonas palustris
AP Fejes, CY Eugene, DR Goodlett, JT Beatty
Photosynthesis research 78 (3), 195-203, 2003
Human variation database: an open-source database template for genomic discovery
AP Fejes, AH Khodabakhshi, I Birol, SJM Jones
Bioinformatics 27 (8), 1155-1156, 2011
The VAAST Variant Prioritizer (VVP): ultrafast, easy to use whole genome variant prioritization tool
S Flygare, EJ Hernandez, L Phan, B Moore, M Li, A Fejes, H Hu, K Eilbeck, ...
BMC bioinformatics 19 (1), 57, 2018
DaVIE: database for the visualization and integration of epigenetic data
AP Fejes, MJ Jones, MS Kobor
Frontiers in genetics 5, 325, 2014
ChIP‐Seq: Mapping of Protein–DNA Interactions
AP Fejes, SJM Jones
Next Generation Genome Sequencing: Towards Personalized Medicine, 201-215, 2008
Drug Discovery in the bioinformatics Age
G Duggan, A Fejes, C Ingram, M Salazar, M Sirski
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