| Impairment of glycolysis-derived l-serine production in astrocytes contributes to cognitive deficits in Alzheimer’s disease J Le Douce, M Maugard, J Veran, M Matos, P Jégo, PA Vigneron, E Faivre, ... Cell metabolism 31 (3), 503-517. e8, 2020 | 196 | 2020 |
| Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning A Hering, L Hansen, TCW Mok, ACS Chung, H Siebert, S Häger, A Lange, ... IEEE Transactions on Medical Imaging 42 (3), 697-712, 2022 | 124 | 2022 |
| Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast JE Iglesias, B Billot, Y Balbastre, A Tabari, J Conklin, RG González, ... Neuroimage 237, 118206, 2021 | 68 | 2021 |
| SynthSR: A public AI tool to turn heterogeneous clinical brain scans into high-resolution T1-weighted images for 3D morphometry JE Iglesias, B Billot, Y Balbastre, C Magdamo, SE Arnold, S Das, ... Science advances 9 (5), eadd3607, 2023 | 35 | 2023 |
| MRI super-resolution using multi-channel total variation M Brudfors, Y Balbastre, P Nachev, J Ashburner Medical Image Understanding and Analysis: 22nd Conference, MIUA 2018 …, 2018 | 22 | 2018 |
| Flexible Bayesian modelling for nonlinear image registration M Brudfors, Y Balbastre, G Flandin, P Nachev, J Ashburner Medical Image Computing and Computer Assisted Intervention–MICCAI 2020: 23rd …, 2020 | 17 | 2020 |
| Primatologist: a modular segmentation pipeline for macaque brain morphometry Y Balbastre, D Rivière, N Souedet, C Fischer, AS Hérard, S Williams, ... Neuroimage 162, 306-321, 2017 | 14 | 2017 |
| Simultaneous voxel‐wise analysis of brain and spinal cord morphometry and microstructure within the SPM framework M Azzarito, SP Kyathanahally, Y Balbastre, M Seif, C Blaiotta, ... Human brain mapping 42 (1), 220-232, 2021 | 12 | 2021 |
| Automated individualization of size-varying and touching neurons in macaque cerebral microscopic images Z You, Y Balbastre, C Bouvier, AS Hérard, P Gipchtein, P Hantraye, C Jan, ... Frontiers in neuroanatomy 13, 98, 2019 | 12 | 2019 |
| A tool for super-resolving multimodal clinical MRI M Brudfors, Y Balbastre, P Nachev, J Ashburner arXiv preprint arXiv:1909.01140, 2019 | 11 | 2019 |
| An algorithm for learning shape and appearance models without annotations J Ashburner, M Brudfors, K Bronik, Y Balbastre Medical image analysis 55, 197-215, 2019 | 11 | 2019 |
| Nonlinear Markov random fields learned via backpropagation M Brudfors, Y Balbastre, J Ashburner Information Processing in Medical Imaging: 26th International Conference …, 2019 | 10 | 2019 |
| Voxel-based statistical analysis of 3D immunostained tissue imaging ME Vandenberghe, N Souedet, AS Hérard, AM Ayral, F Letronne, ... Frontiers in Neuroscience 12, 754, 2018 | 9 | 2018 |
| Robust supervised segmentation of neuropathology whole-slide microscopy images ME Vandenberghe, Y Balbastre, N Souedet, AS Herard, M Dhenain, ... 2015 37th Annual International Conference of the IEEE Engineering in …, 2015 | 9 | 2015 |
| SuperWarp: Supervised learning and warping on U-Net for invariant subvoxel-precise registration SI Young, Y Balbastre, AV Dalca, WM Wells, JE Iglesias, B Fischl International Workshop on Biomedical Image Registration, 103-115, 2022 | 8 | 2022 |
| Volumetric characterization of microvasculature in ex vivo human brain samples by serial sectioning optical coherence tomography J Yang, S Chang, IA Chen, S Kura, GA Rosen, NA Saltiel, BR Huber, ... IEEE Transactions on Biomedical Engineering 69 (12), 3645-3656, 2022 | 8 | 2022 |
| Automated cell individualization and counting in cerebral microscopic images Z You, ME Vandenberghe, Y Balbastre, N Souedet, P Hantraye, C Jan, ... 2016 IEEE International Conference on Image Processing (ICIP), 3389-3393, 2016 | 8 | 2016 |
| Assessment of simplified methods for quantification of [18F]-DPA-714 using 3D whole-brain TSPO immunohistochemistry in a non-human primate N Van Camp, Y Balbastre, AS Herard, S Lavisse, C Tauber, C Wimberley, ... Journal of Cerebral Blood Flow & Metabolism 40 (5), 1103-1116, 2020 | 7 | 2020 |
| A validation dataset for Macaque brain MRI segmentation Y Balbastre, D Rivière, N Souedet, C Fischer, AS Hérard, S Williams, ... Data in Brief 16, 37-42, 2018 | 7 | 2018 |
| Empirical bayesian mixture models for medical image translation M Brudfors, J Ashburner, P Nachev, Y Balbastre Simulation and Synthesis in Medical Imaging: 4th International Workshop …, 2019 | 6 | 2019 |
