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Shiping Liu
Shiping Liu
BGI Research; School of Life Sciences, Sun Yat-sen University
Verified email at genomics.cn
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Year
Whole-genome analyses resolve early branches in the tree of life of modern birds
ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ...
Science 346 (6215), 1320-1331, 2014
18952014
The sequence and de novo assembly of the giant panda genome
R Li, W Fan, G Tian, H Zhu, L He, J Cai, Q Huang, Q Cai, B Li, Y Bai, ...
Nature 463 (7279), 311-317, 2010
13742010
Comparative genomics reveals insights into avian genome evolution and adaptation
G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ...
Science 346 (6215), 1311-1320, 2014
10352014
Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball-patterned arrays
A Chen, S Liao, M Cheng, K Ma, L Wu, Y Lai, X Qiu, J Yang, J Xu, S Hao, ...
Cell 185 (10), 1777-1792. e21, 2022
5292022
Whole-genome sequence of Schistosoma haematobium
ND Young, AR Jex, B Li, S Liu, L Yang, Z Xiong, Y Li, C Cantacessi, ...
Nature genetics 44 (2), 221-225, 2012
4682012
Single-cell landscape of the ecosystem in early-relapse hepatocellular carcinoma
Y Sun, L Wu, YU Zhong, K Zhou, Y Hou, Z Wang, Z Zhang, J Xie, C Wang, ...
Cell 184 (2), 404-421. e16, 2021
4402021
Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears
S Liu, ED Lorenzen, M Fumagalli, B Li, K Harris, Z Xiong, L Zhou, ...
Cell 157 (4), 785-794, 2014
3712014
Ascaris suum draft genome
AR Jex, S Liu, B Li, ND Young, RS Hall, Y Li, L Yang, N Zeng, X Xu, ...
Nature 479 (7374), 529-533, 2011
3092011
Genomic and oncogenic preference of HBV integration in hepatocellular carcinoma
LH Zhao, X Liu, HX Yan, WY Li, X Zeng, Y Yang, J Zhao, SP Liu, ...
Nature communications 7 (1), 12992, 2016
2912016
Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes
YB Sun, ZJ Xiong, XY Xiang, SP Liu, WW Zhou, XL Tu, L Zhong, L Wang, ...
Proceedings of the National Academy of Sciences 112 (11), E1257-E1262, 2015
2052015
Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity
L Liu, C Liu, A Quintero, L Wu, Y Yuan, M Wang, M Cheng, L Leng, L Xu, ...
Nature communications 10 (1), 470, 2019
1912019
Genomic legacy of the African cheetah, Acinonyx jubatus
P Dobrynin, S Liu, G Tamazian, Z Xiong, AA Yurchenko, ...
Genome biology 16, 1-20, 2015
1892015
The sequence, structure and evolutionary features of HOTAIR in mammals
S He, S Liu, H Zhu
BMC evolutionary biology 11, 1-14, 2011
1832011
Hologenomic adaptations underlying the evolution of sanguivory in the common vampire bat
ML Zepeda Mendoza, Z Xiong, M Escalera-Zamudio, AK Runge, J Thézé, ...
Nature ecology & evolution 2 (4), 659-668, 2018
1522018
Red fox genome assembly identifies genomic regions associated with tame and aggressive behaviours
AV Kukekova, JL Johnson, X Xiang, S Feng, S Liu, HM Rando, ...
Nature ecology & evolution 2 (9), 1479-1491, 2018
1362018
Genomic signatures of near-extinction and rebirth of the crested ibis and other endangered bird species
S Li, BO Li, C Cheng, Z Xiong, Q Liu, J Lai, HV Carey, Q Zhang, H Zheng, ...
Genome biology 15, 1-17, 2014
1252014
Dissecting spatial heterogeneity and the immune-evasion mechanism of CTCs by single-cell RNA-seq in hepatocellular carcinoma
YF Sun, L Wu, SP Liu, MM Jiang, B Hu, KQ Zhou, W Guo, Y Xu, Y Zhong, ...
Nature Communications 12 (1), 4091, 2021
1152021
Cell transcriptomic atlas of the non-human primate Macaca fascicularis
L Han, X Wei, C Liu, G Volpe, Z Zhuang, X Zou, Z Wang, T Pan, Y Yuan, ...
Nature 604 (7907), 723-731, 2022
1052022
The single-cell stereo-seq reveals region-specific cell subtypes and transcriptome profiling in Arabidopsis leaves
K Xia, HX Sun, J Li, J Li, Y Zhao, L Chen, C Qin, R Chen, Z Chen, G Liu, ...
Developmental cell 57 (10), 1299-1310. e4, 2022
992022
Comparative analysis of sequencing technologies for single-cell transcriptomics
KN Natarajan, Z Miao, M Jiang, X Huang, H Zhou, J Xie, C Wang, S Qin, ...
Genome Biology 20, 1-8, 2019
942019
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