Alexander Pertsemlidis

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John MinnaProfessor of Internal Medicine and Pharmacology, University of Texas Southwestern Medical CenterVerified email at utsouthwestern.edu
Harold R GarnerChief Scientific Officer, Orbit GenomicsVerified email at orbitgenomics.com
Julia KozlitinaAssociate Professor, University of Texas Southwestern Medical CenterVerified email at UTSouthwestern.edu
Chao XingMcDermott Center, University of Texas Southwestern Medical CenterVerified email at utsouthwestern.edu
RUTH MCPHERSONUniversity of Ottawa Heart instituteVerified email at ottawaheart.ca
Len A. PennacchioSenior Staff Scientist, Lawrence Berkeley National LaboratoryVerified email at lbl.gov
Xiaojie YuUniversal Cells - AstellasVerified email at universalcells.com
Adi GazdarProfessor of Pathology, UT Southwestern Medical CenterVerified email at utsouthwestern.edu
Philip A. GregoryAssociate Professor, Centre for Cancer Biology, University of South AustraliaVerified email at unisa.edu.au
Chad CreightonProfessor of Medicine, Baylor College of MedicineVerified email at bcm.edu
Don L. Gibbons, MD, PhDProfessor, Dept. of Thoracic/Head and Neck Medical Oncology, MD Anderson Cancer CenterVerified email at mdanderson.org
Stefano Romeo, ProfessorUniversity of GothenburgVerified email at wlab.gu.se
A K SoperSTFCVerified email at stfc.ac.uk
Milind SuraokarInstructor, MD Anderson Cancer CenterVerified email at mdanderson.org
Adam KostiEmory University, School of MedicineVerified email at emory.edu
Alexandre F. R. StewartProfessor, University of Ottawa Heart InstituteVerified email at ottawaheart.ca
David HindsResearch Fellow, 23andMe, Inc.Verified email at 23andme.com
Gregory J GoodallProfessor, Centre for Cancer Biology, SA Pathology, and University of South AustraliaVerified email at health.sa.gov.au
richard cooperloyola university chicagoVerified email at luc.edu
Jon SorensonVP, Technology Development at AtomwiseVerified email at atomwise.com

Alexander Pertsemlidis

Professor, UT Health Science Center at San Antonio

Verified email at uthscsa.edu - Homepage

non-coding RNA cancer computation


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Genetic variation in PNPLA3 confers susceptibility to nonalcoholic fatty liver disease S Romeo, J Kozlitina, C Xing, A Pertsemlidis, D Cox, LA Pennacchio, ... Nature genetics 40 (12), 1461-1465, 2008	3474	2008
A common allele on chromosome 9 associated with coronary heart disease R McPherson, A Pertsemlidis, N Kavaslar, A Stewart, R Roberts, DR Cox, ... Obstetrical & Gynecological Survey 62 (9), 584-585, 2007	2082	2007
Low LDL cholesterol in individuals of African descent resulting from frequent nonsense mutations in PCSK9 J Cohen, A Pertsemlidis, IK Kotowski, R Graham, CK Garcia, HH Hobbs Nature genetics 37 (2), 161-165, 2005	1602	2005
Multiple rare alleles contribute to low plasma levels of HDL cholesterol JC Cohen, RS Kiss, A Pertsemlidis, YL Marcel, R McPherson, HH Hobbs Science 305 (5685), 869-872, 2004	1263	2004
Multiple rare alleles contribute to low plasma levels of HDL cholesterol JC Cohen, RS Kiss, A Pertsemlidis, YL Marcel, R McPherson, HH Hobbs Science 305 (5685), 869-872, 2004	1263	2004
A spectrum of PCSK9 alleles contributes to plasma levels of low-density lipoprotein cholesterol IK Kotowski, A Pertsemlidis, A Luke, RS Cooper, GL Vega, JC Cohen, ... The American Journal of Human Genetics 78 (3), 410-422, 2006	619	2006
Contextual extracellular cues promote tumor cell EMT and metastasis by regulating miR-200 family expression DL Gibbons, W Lin, CJ Creighton, ZH Rizvi, PA Gregory, GJ Goodall, ... Genes & development 23 (18), 2140-2151, 2009	559	2009
Multiple rare variants in NPC1L1 associated with reduced sterol absorption and plasma low-density lipoprotein levels JC Cohen, A Pertsemlidis, S Fahmi, S Esmail, GL Vega, SM Grundy, ... Proceedings of the National Academy of Sciences 103 (6), 1810-1815, 2006	470	2006
Diverse pathways generate microRNA-like RNAs and Dicer-independent small interfering RNAs in fungi HC Lee, L Li, W Gu, Z Xue, SK Crosthwaite, A Pertsemlidis, ZA Lewis, ... Molecular cell 38 (6), 803-814, 2010	398	2010
Association of extensive polymorphisms in the SLAM/CD2 gene cluster with murine lupus AE Wandstrat, C Nguyen, N Limaye, AY Chan, S Subramanian, XH Tian, ... Immunity 21 (6), 769-780, 2004	322	2004
miR-93, miR-98, and miR-197 Regulate Expression of Tumor Suppressor Gene FUS1 L Du, JJ Schageman, MC Subauste, B Saber, SM Hammond, L Prudkin, ... Molecular Cancer Research 7 (8), 1234-1243, 2009	277	2009
Repeat polymorphisms within gene regions: phenotypic and evolutionary implications JD Wren, E Forgacs, JW Fondon, A Pertsemlidis, SY Cheng, T Gallardo, ... The American Journal of Human Genetics 67 (2), 345-356, 2000	194	2000
ZEB1 drives prometastatic actin cytoskeletal remodeling by downregulating miR-34a expression YH Ahn, DL Gibbons, D Chakravarti, CJ Creighton, ZH Rizvi, HP Adams, ... The Journal of clinical investigation 122 (9), 3170-3183, 2012	188	2012
Genomic loss of tumor suppressor miRNA-204 promotes cancer cell migration and invasion by activating AKT/mTOR/Rac1 signaling and actin reorganization JS Imam, JR Plyler, H Bansal, S Prajapati, S Bansal, J Rebeles, HIH Chen, ... PloS one 7 (12), e52397, 2012	177	2012
Having a BLAST with bioinformatics (and avoiding BLASTphemy) A Pertsemlidis, JW Fondon Genome biology 2, 1-10, 2001	171	2001
Method and system for information retrieval H Garner, A Pertsemlidis US Patent App. 10/196,738, 2003	134	2003
Determining the role of hydration forces in protein folding JM Sorenson, G Hura, AK Soper, A Pertsemlidis, T Head-Gordon The Journal of Physical Chemistry B 103 (26), 5413-5426, 1999	121	1999
Determining the role of hydration forces in protein folding JM Sorenson, G Hura, AK Soper, A Pertsemlidis, T Head-Gordon The Journal of Physical Chemistry B 103 (26), 5413-5426, 1999	121	1999
Direct evidence for modified solvent structure within the hydration shell of a hydrophobic amino acid. A Pertsemlidis, AM Saxena, AK Soper, T Head-Gordon, RM Glaeser Proceedings of the National Academy of Sciences 93 (20), 10769-10774, 1996	120	1996
miR-337-3p and its targets STAT3 and RAP1A modulate taxane sensitivity in non-small cell lung cancers L Du, MC Subauste, C DeSevo, Z Zhao, M Baker, R Borkowski, ... PloS one 7 (6), e39167, 2012	119	2012

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