Xinxia Peng
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A combined transcriptome and proteome survey of malaria parasite liver stages
AS Tarun, X Peng, RF Dumpit, Y Ogata, H Silva-Rivera, N Camargo, ...
Proceedings of the National Academy of Sciences 105 (1), 305-310, 2008
Lethal influenza virus infection in macaques is associated with early dysregulation of inflammatory related genes
C Cillóniz, K Shinya, X Peng, MJ Korth, SC Proll, LD Aicher, VS Carter, ...
PLoS pathogens 5 (10), 2009
Computational identification of hepatitis C virus associated microRNA-mRNA regulatory modules in human livers
X Peng, Y Li, KA Walters, ER Rosenzweig, SL Lederer, LD Aicher, S Proll, ...
BMC genomics 10 (1), 373, 2009
Unique signatures of long noncoding RNA expression in response to virus infection and altered innate immune signaling
X Peng, L Gralinski, CD Armour, MT Ferris, MJ Thomas, S Proll, ...
MBio 1 (5), e00206-10, 2010
Compression of next-generation sequencing reads aided by highly efficient de novo assembly
DC Jones, WL Ruzzo, X Peng, MG Katze
Nucleic acids research 40 (22), e171-e171, 2012
MicroRNA expression and virulence in pandemic influenza virus-infected mice
Y Li, EY Chan, J Li, C Ni, X Peng, E Rosenzweig, TM Tumpey, MG Katze
Journal of virology 84 (6), 3023-3032, 2010
Infection with MERS-CoV causes lethal pneumonia in the common marmoset
D Falzarano, E de Wit, F Feldmann, AL Rasmussen, A Okumura, X Peng, ...
PLoS pathogens 10 (8), 2014
Lethal dissemination of H5N1 influenza virus is associated with dysregulation of inflammation and lipoxin signaling in a mouse model of infection
C Cilloniz, MJ Pantin-Jackwood, C Ni, AG Goodman, X Peng, SC Proll, ...
Journal of virology 84 (15), 7613-7624, 2010
Host cell transcriptional profiling during malaria liver stage infection reveals a coordinated and sequential set of biological events
SS Albuquerque, C Carret, AR Grosso, AS Tarun, X Peng, SHI Kappe, ...
BMC genomics 10 (1), 270, 2009
Distinct malaria parasite sporozoites reveal transcriptional changes that cause differential tissue infection competence in the mosquito vector and mammalian host
SA Mikolajczak, H Silva-Rivera, X Peng, AS Tarun, N Camargo, ...
Molecular and cellular biology 28 (20), 6196-6207, 2008
The draft genome sequence of the ferret (Mustela putorius furo) facilitates study of human respiratory disease
X Peng, J Alföldi, K Gori, AJ Eisfeld, SR Tyler, J Tisoncik-Go, D Brawand, ...
Nature biotechnology 32 (12), 1250-1255, 2014
Next-generation sequencing reveals HIV-1-mediated suppression of T cell activation and RNA processing and regulation of noncoding RNA expression in a CD4+ T cell line
ST Chang, P Sova, X Peng, J Weiss, GL Law, RE Palermo, MG Katze
MBio 2 (5), e00134-11, 2011
Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts
L Josset, N Tchitchek, LE Gralinski, MT Ferris, AJ Eisfeld, RR Green, ...
RNA biology 11 (7), 875-890, 2014
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics
L Pipes, S Li, M Bozinoski, R Palermo, X Peng, P Blood, S Kelly, ...
Nucleic acids research 41 (D1), D906-D914, 2013
Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection
X Peng, L Gralinski, MT Ferris, MB Frieman, MJ Thomas, S Proll, MJ Korth, ...
MBio 2 (6), e00198-11, 2011
Virus–host interactions: from systems biology to translational research
X Peng, EY Chan, Y Li, DL Diamond, MJ Korth, MG Katze
Current opinion in microbiology 12 (4), 432-438, 2009
SAP1 is a critical post‐transcriptional regulator of infectivity in malaria parasite sporozoite stages
ASI Aly, SE Lindner, DC MacKellar, X Peng, SHI Kappe
Molecular microbiology 79 (4), 929-939, 2011
Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR)
X Peng, J Thierry-Mieg, D Thierry-Mieg, A Nishida, L Pipes, M Bozinoski, ...
Nucleic acids research 43 (D1), D737-D742, 2015
The alpha/beta interferon receptor provides protection against influenza virus replication but is dispensable for inflammatory response signaling
AG Goodman, H Zeng, SC Proll, X Peng, C Cillóniz, VS Carter, MJ Korth, ...
Journal of virology 84 (4), 2027-2037, 2010
P58IPK: A novel “CIHD” member of the host innate defense response against pathogenic virus infection
AG Goodman, JL Fornek, GR Medigeshi, LA Perrone, X Peng, MD Dyer, ...
PLoS pathogens 5 (5), 2009
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