Xinxia Peng
TitleCited byYear
A combined transcriptome and proteome survey of malaria parasite liver stages
AS Tarun, X Peng, RF Dumpit, Y Ogata, H Silva-Rivera, N Camargo, ...
Proceedings of the National Academy of Sciences 105 (1), 305-310, 2008
3352008
Lethal influenza virus infection in macaques is associated with early dysregulation of inflammatory related genes
C Cillóniz, K Shinya, X Peng, MJ Korth, SC Proll, LD Aicher, VS Carter, ...
PLoS pathogens 5 (10), e1000604, 2009
1862009
Computational identification of hepatitis C virus associated microRNA-mRNA regulatory modules in human livers
X Peng, Y Li, KA Walters, ER Rosenzweig, SL Lederer, LD Aicher, S Proll, ...
BMC genomics 10 (1), 373, 2009
1792009
Unique signatures of long noncoding RNA expression in response to virus infection and altered innate immune signaling
X Peng, L Gralinski, CD Armour, MT Ferris, MJ Thomas, S Proll, ...
MBio 1 (5), e00206-10, 2010
1662010
Compression of next-generation sequencing reads aided by highly efficient de novo assembly
DC Jones, WL Ruzzo, X Peng, MG Katze
Nucleic acids research 40 (22), e171-e171, 2012
1572012
MicroRNA expression and virulence in pandemic influenza virus-infected mice
Y Li, EY Chan, J Li, C Ni, X Peng, E Rosenzweig, TM Tumpey, MG Katze
Journal of virology 84 (6), 3023-3032, 2010
1462010
Infection with MERS-CoV causes lethal pneumonia in the common marmoset
D Falzarano, E de Wit, F Feldmann, AL Rasmussen, A Okumura, X Peng, ...
PLoS pathogens 10 (8), e1004250, 2014
1312014
Host cell transcriptional profiling during malaria liver stage infection reveals a coordinated and sequential set of biological events
SS Albuquerque, C Carret, AR Grosso, AS Tarun, X Peng, SHI Kappe, ...
BMC genomics 10 (1), 270, 2009
912009
Lethal dissemination of H5N1 influenza virus is associated with dysregulation of inflammation and lipoxin signaling in a mouse model of infection
C Cilloniz, MJ Pantin-Jackwood, C Ni, AG Goodman, X Peng, SC Proll, ...
Journal of virology 84 (15), 7613-7624, 2010
902010
Distinct malaria parasite sporozoites reveal transcriptional changes that cause differential tissue infection competence in the mosquito vector and mammalian host
SA Mikolajczak, H Silva-Rivera, X Peng, AS Tarun, N Camargo, ...
Molecular and cellular biology 28 (20), 6196-6207, 2008
732008
The draft genome sequence of the ferret (Mustela putorius furo) facilitates study of human respiratory disease
X Peng, J Alföldi, K Gori, AJ Eisfeld, SR Tyler, J Tisoncik-Go, D Brawand, ...
Nature biotechnology 32 (12), 1250, 2014
632014
Next-generation sequencing reveals HIV-1-mediated suppression of T cell activation and RNA processing and regulation of noncoding RNA expression in a CD4+ T cell line
ST Chang, P Sova, X Peng, J Weiss, GL Law, RE Palermo, MG Katze
MBio 2 (5), e00134-11, 2011
582011
Annotation of long non-coding RNAs expressed in collaborative cross founder mice in response to respiratory virus infection reveals a new class of interferon-stimulated transcripts
L Josset, N Tchitchek, LE Gralinski, MT Ferris, AJ Eisfeld, RR Green, ...
RNA biology 11 (7), 875-890, 2014
532014
Virus–host interactions: from systems biology to translational research
X Peng, EY Chan, Y Li, DL Diamond, MJ Korth, MG Katze
Current opinion in microbiology 12 (4), 432-438, 2009
512009
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics
L Pipes, S Li, M Bozinoski, R Palermo, X Peng, P Blood, S Kelly, ...
Nucleic acids research 41 (D1), D906-D914, 2012
472012
Integrative deep sequencing of the mouse lung transcriptome reveals differential expression of diverse classes of small RNAs in response to respiratory virus infection
X Peng, L Gralinski, MT Ferris, MB Frieman, MJ Thomas, S Proll, MJ Korth, ...
MBio 2 (6), e00198-11, 2011
472011
SAP1 is a critical post‐transcriptional regulator of infectivity in malaria parasite sporozoite stages
ASI Aly, SE Lindner, DC MacKellar, X Peng, SHI Kappe
Molecular microbiology 79 (4), 929-939, 2011
472011
The alpha/beta interferon receptor provides protection against influenza virus replication but is dispensable for inflammatory response signaling
AG Goodman, H Zeng, SC Proll, X Peng, C Cillóniz, VS Carter, MJ Korth, ...
Journal of virology 84 (4), 2027-2037, 2010
442010
Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR)
X Peng, J Thierry-Mieg, D Thierry-Mieg, A Nishida, L Pipes, M Bozinoski, ...
Nucleic acids research 43 (D1), D737-D742, 2014
402014
A new approach to bias correction in RNA-Seq
DC Jones, WL Ruzzo, X Peng, MG Katze
Bioinformatics 28 (7), 921-928, 2012
352012
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Articles 1–20