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Alex N Nguyen Ba
Alex N Nguyen Ba
Assistant Professor, University of Toronto
Verified email at utoronto.ca - Homepage
Title
Cited by
Cited by
Year
Population genomics of domestic and wild yeasts
G Liti, DM Carter, AM Moses, J Warringer, L Parts, SA James, RP Davey, ...
Nature 458 (7236), 337-341, 2009
15562009
NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction
AN Nguyen Ba, A Pogoutse, N Provart, AM Moses
BMC Bioinformatics 10 (1), 202, 2009
5422009
A high-definition view of functional genetic variation from natural yeast genomes
A Bergström, JT Simpson, F Salinas, B Barré, L Parts, A Zia, ...
Molecular Biology and Evolution 31 (4), 872-888, 2014
2882014
Proteome-wide discovery of evolutionary conserved sequences in disordered regions
AN Nguyen Ba, BJ Yeh, D van Dyk, AR Davidson, BJ Andrews, EL Weiss, ...
Science Signaling 5 (215), rs1-rs1, 2012
1132012
Proteome-wide signatures of function in highly diverged intrinsically disordered regions
T Zarin, B Strome, AN Nguyen Ba, S Alberti, JD Forman-Kay, AM Moses
Elife 8, e46883, 2019
982019
High quality de novo sequencing and assembly of the Saccharomyces arboricolus genome
G Liti, AN Nguyen Ba, M Blythe, CA Müller, A Bergström, FA Cubillos, ...
BMC Genomics 14 (1), 69, 2013
912013
High-resolution lineage tracking reveals travelling wave of adaptation in laboratory yeast
AN Nguyen Ba*, I Cvijović*, JI Rojas Echenique*, KR Lawrence, ...
Nature 575 (7783), 494-499, 2019
852019
A quantitative literature-curated gold standard for kinase-substrate pairs
S Sharifpoor*, AN Nguyen Ba*, JY Young, D van Dyk, H Friesen, ...
Genome Biology 12 (4), 1, 2011
752011
Evolution of characterized phosphorylation sites in budding yeast
AN Nguyen Ba, AM Moses
Molecular Biology and Evolution 27 (9), 2027-2037, 2010
742010
Exploring whole-genome duplicate gene retention with complex genetic interaction analysis
E Kuzmin, B VanderSluis, AN Nguyen Ba, W Wang, EN Koch, M Usaj, ...
Science 368 (6498), eaaz5667, 2020
542020
Microwave-generated steam decontamination of N95 respirators utilizing universally accessible materials.
KE Zulauf, AB Green, AN Nguyen Ba, T Jagdish, D Reif, R Seeley, A Dale, ...
mBio 11 (e00997-20), 2020
532020
Selection maintains signaling function of a highly diverged intrinsically disordered region
T Zarin, CN Tsai, AN Nguyen Ba, AM Moses
Proceedings of the National Academy of Sciences, 201614787, 2017
532017
The Structure of an NDR/LATS Kinase–Mob Complex Reveals a Novel Kinase–Coactivator System and Substrate Docking Mechanism
G Gógl, KD Schneider, BJ Yeh, N Alam, AN Nguyen Ba, AM Moses, ...
PLoS Biology 13 (5), e1002146, 2015
462015
Phenotypic and molecular evolution across 10,000 generations in laboratory budding yeast populations
MS Johnson, S Gopalakrishnan, J Goyal, ME Dillingham, CW Bakerlee, ...
Elife 10, e63910, 2021
362021
Modular epistasis and the compensatory evolution of gene deletion mutants
JI Rojas Echenique, S Kryazhimskiy, AN Nguyen Ba, MM Desai
PLoS Genetics 15 (2), e1007958, 2019
362019
Detecting Functional Divergence after Gene Duplication through Evolutionary Changes in Posttranslational Regulatory Sequences
AN Nguyen Ba, B Strome, JJ Hua, J Desmond, I Gagnon-Arsenault, ...
PLoS Computational Biology 10 (12), e1003977, 2014
362014
Experimental Studies of Evolutionary Dynamics in Microbes
I Cvijović, AN Nguyen Ba, MM Desai
Trends in Genetics 34 (9), 693-703, 2018
322018
Polymorphism analysis reveals reduced negative selection and elevated rate of insertions and deletions in intrinsically disordered protein regions
T Khan, GM Douglas, P Patel, AN Nguyen Ba, AM Moses
Genome Biology and Evolution 7 (6), 1815-1826, 2015
312015
Chance and necessity in the pleiotropic consequences of adaptation for budding yeast
ER Jerison, AN Nguyen Ba, MM Desai, S Kryazhimskiy
Nature Ecology & Evolution 4 (4), 601-611, 2020
302020
Predicting kinase substrates using conservation of local motif density
ACW Lai, AN Nguyen Ba, AM Moses
Bioinformatics 28 (7), 962-969, 2012
272012
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Articles 1–20