Michael DJ Lynch
Michael DJ Lynch
Metagenom Bio Life Science and Department of Biology, University of Waterloo
Verified email at uwaterloo.ca - Homepage
Title
Cited by
Cited by
Year
Generation of multimillion-sequence 16S rRNA gene libraries from complex microbial communities by assembling paired-end Illumina reads
AK Bartram, MDJ Lynch, JC Stearns, G Moreno-Hagelsieb, JD Neufeld
Applied and environmental microbiology 77 (11), 3846-3852, 2011
7572011
Ecology and exploration of the rare biosphere
MDJ Lynch, JD Neufeld
Nature Reviews Microbiology 13 (4), 217-229, 2015
5272015
Bacterial biogeography of the human digestive tract
JC Stearns, MDJ Lynch, DB Senadheera, HC Tenenbaum, MB Goldberg, ...
Scientific reports 1 (1), 1-9, 2011
3602011
A NEW LOOK AT AN ANCIENT ORDER: GENERIC REVISION OF THE BANGIALES (RHODOPHYTA)1
JE Sutherland, SC Lindstrom, WA Nelson, J Brodie, MDJ Lynch, ...
Journal of phycology 47 (5), 1131-1151, 2011
3252011
Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice
G De Palma, MDJ Lynch, J Lu, VT Dang, Y Deng, J Jury, G Umeh, ...
Science translational medicine 9 (379), 2017
2712017
Evaluating bias of Illumina-based bacterial 16S rRNA gene profiles
K Kennedy, MW Hall, MDJ Lynch, G Moreno-Hagelsieb, JD Neufeld
Applied and environmental microbiology 80 (18), 5717-5722, 2014
2082014
Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm
AK Bartram, X Jiang, MDJ Lynch, AP Masella, GW Nicol, J Dushoff, ...
FEMS microbiology ecology 87 (2), 403-415, 2014
1252014
Diversity of basidiomycetes in Michigan agricultural soils
MDJ Lynch, RG Thorn
Applied and environmental microbiology 72 (11), 7050-7056, 2006
1182006
Aquatic metagenomes implicate Thaumarchaeota in global cobalamin production
AC Doxey, DA Kurtz, MDJ Lynch, LA Sauder, JD Neufeld
The ISME journal 9 (2), 461-471, 2015
1102015
Prevalence of anaerobic ammonium-oxidizing bacteria in contaminated groundwater
TA Moore, Y Xing, B Lazenby, MDJ Lynch, S Schiff, WD Robertson, ...
Environmental science & technology 45 (17), 7217-7225, 2011
992011
Targeted recovery of novel phylogenetic diversity from next-generation sequence data
MDJ Lynch, AK Bartram, JD Neufeld
The ISME journal 6 (11), 2067-2077, 2012
572012
Bacterial community composition of chronic periodontitis and novel oral sampling sites for detecting disease indicators
V Galimanas, MW Hall, N Singh, MDJ Lynch, M Goldberg, H Tenenbaum, ...
Microbiome 2 (1), 1-13, 2014
542014
AXIOME: automated exploration of microbial diversity
MDJ Lynch, AP Masella, MW Hall, AK Bartram, JD Neufeld
GigaScience 2 (1), 2047-217X-2-3, 2013
512013
Fungi and eukaryotic algae
RG THORN, MDJ LYNCH
Soil microbiology, ecology and biochemistry, 145-162, 2007
382007
Insights into the evolutionary origins of clostridial neurotoxins from analysis of the Clostridium botulinum strain A neurotoxin gene cluster
AC Doxey, MDJ Lynch, KM Müller, EM Meiering, BJ McConkey
BMC evolutionary biology 8 (1), 1-9, 2008
312008
Porphyra: Complex Life Histories in a Harsh Environment: P. umbilicalis, an Intertidal Red Alga for Genomic Analysis
E Gantt, GM Berg, D Bhattacharya, NA Blouin, JA Brodie, CX Chan, ...
Red algae in the genomic age, 129-148, 2010
292010
Microbial community analysis using high‐throughput amplicon sequencing
D Ionescu, WA Overholt, MDJ Lynch, JD Neufeld, A Naqib, SJ Green
Manual of environmental microbiology, 2.4. 2-1-2.4. 2-26, 2016
152016
Norwegian deep‐water coral reefs: cultivation and molecular analysis of planktonic microbial communities
S Jensen, MDJ Lynch, JL Ray, JD Neufeld, M Hovland
Environmental microbiology 17 (10), 3597-3609, 2015
152015
Phylogenetic position and ISSR-estimated intraspecific genetic variation of Bangia maxima (Bangiales, Rhodophyta)
MDJ Lynch, RG Sheath, KM Müller
Phycologia 47 (6), 599-613, 2008
102008
Bangiophytes: from one class to six; where do we go from here?
KM Müller, MDJ Lynch, RG Sheath
Red Algae in the Genomic Age, 241-259, 2010
82010
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Articles 1–20