| Genome-wide characterization of the routes to pluripotency SMI Hussein, MC Puri, PD Tonge, M Benevento, AJ Corso, JL Clancy, ... Nature 516 (7530), 198-206, 2014 | 238 | 2014 |
| A stepwise model of reaction-diffusion and positional information governs self-organized human peri-gastrulation-like patterning M Tewary, J Ostblom, L Prochazka, T Zulueta-Coarasa, N Shakiba, ... Development 144 (23), 4298-4312, 2017 | 156 | 2017 |
| Derivation, expansion and differentiation of induced pluripotent stem cells in continuous suspension cultures DA Fluri, PD Tonge, H Song, RP Baptista, N Shakiba, S Shukla, G Clarke, ... Nature methods 9 (5), 509-516, 2012 | 130 | 2012 |
| Electrodeformation for single cell mechanical characterization J Chen, M Abdelgawad, L Yu, N Shakiba, WY Chien, Z Lu, WR Geddie, ... Journal of Micromechanics and Microengineering 21 (5), 054012, 2011 | 108 | 2011 |
| CD24 tracks divergent pluripotent states in mouse and human cells N Shakiba, CA White, YY Lipsitz, A Yachie-Kinoshita, PD Tonge, ... Nature communications 6 (1), 7329, 2015 | 91 | 2015 |
| Cell competition during reprogramming gives rise to dominant clones N Shakiba, A Fahmy, G Jayakumaran, S McGibbon, L David, D Trcka, ... Science 364 (6438), eaan0925, 2019 | 89 | 2019 |
| Stem cell bioengineering: building from stem cell biology M Tewary, N Shakiba, PW Zandstra Nature Reviews Genetics 19 (10), 595-614, 2018 | 88 | 2018 |
| The optoelectronic microrobot: A versatile toolbox for micromanipulation S Zhang, EY Scott, J Singh, Y Chen, Y Zhang, M Elsayed, ... Proceedings of the National Academy of sciences 116 (30), 14823-14828, 2019 | 84 | 2019 |
| Patterned optoelectronic tweezers: A new scheme for selecting, moving, and storing dielectric particles and cells S Zhang, N Shakiba, Y Chen, Y Zhang, P Tian, J Singh, MD Chamberlain, ... Small 14 (45), 1803342, 2018 | 49 | 2018 |
| High-throughput micropatterning platform reveals Nodal-dependent bisection of peri-gastrulation–associated versus preneurulation-associated fate patterning M Tewary, D Dziedzicka, J Ostblom, L Prochazka, N Shakiba, T Heydari, ... PLoS biology 17 (10), e3000081, 2019 | 45 | 2019 |
| Context-aware synthetic biology by controller design: Engineering the mammalian cell N Shakiba, RD Jones, R Weiss, D Del Vecchio Cell systems 12 (6), 561-592, 2021 | 39 | 2021 |
| Engineering cell fitness: lessons for regenerative medicine N Shakiba, PW Zandstra Current Opinion in Biotechnology 47, 7-15, 2017 | 27 | 2017 |
| Searching for superspreaders: Identifying epidemic patterns associated with superspreading events in stochastic models CJ Edholm, BO Emerenini, AL Murillo, O Saucedo, N Shakiba, X Wang, ... Understanding complex biological systems with mathematics, 1-29, 2018 | 17 | 2018 |
| How can Waddington-like landscapes facilitate insights beyond developmental biology? N Shakiba, C Li, J Garcia-Ojalvo, KH Cho, K Patil, A Walczak, YY Liu, ... Cell systems 13 (1), 4-9, 2022 | 11 | 2022 |
| Effects of environmental variability on superspreading transmission events in stochastic epidemic models N Shakiba, CJ Edholm, BO Emerenini, AL Murillo, A Peace, O Saucedo, ... Infectious Disease Modelling 6, 560-583, 2021 | 8 | 2021 |
| A hybrid epidemic model to explore stochasticity in COVID-19 dynamics KKL Hwang, CJ Edholm, O Saucedo, LJS Allen, N Shakiba Bulletin of Mathematical Biology 84 (9), 91, 2022 | 7 | 2022 |
| A defined platform of human peri-gastrulation-like biological fate patterning reveals coordination between Reaction-Diffusion and Positional-Information M Tewary, J □ stblom, N Shakiba, PW Zandstra BioRxiv, 102376, 2017 | 7 | 2017 |
| The field of cell competition comes of age: Semantics and technological synergy K Maheden, VW Zhang, N Shakiba Frontiers in Cell and Developmental Biology 10, 891569, 2022 | 5 | 2022 |
| Synthetic genetic circuits to uncover and enforce the OCT4 trajectories of successful reprogramming of human fibroblasts K Ilia, N Shakiba, T Bingham, RD Jones, MM Kaminski, E Aravera, ... bioRxiv, 2023 | 4 | 2023 |
| Highly efficient reprogrammable mouse lines with integrated reporters to track the route to pluripotency J Elbaz, MC Puri, M Faiz, KWA Bang, L Nguyen, B Makovoz, ... Proceedings of the National Academy of Sciences 119 (49), e2207824119, 2022 | 2 | 2022 |
