Allen Zhang
Allen Zhang
Verified email at bccrc.ca
TitleCited byYear
JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles
A Mathelier, X Zhao, AW Zhang, F Parcy, R Worsley-Hunt, DJ Arenillas, ...
Nucleic acids research 42 (D1), D142-D147, 2013
9042013
JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
A Mathelier, O Fornes, DJ Arenillas, C Chen, G Denay, J Lee, W Shi, ...
Nucleic acids research 44 (D1), D110-D115, 2015
6532015
Divergent modes of clonal spread and intraperitoneal mixing in high-grade serous ovarian cancer
A McPherson, A Roth, E Laks, T Masud, A Bashashati, AW Zhang, G Ha, ...
Nature genetics 48 (7), 758, 2016
1082016
Genomic consequences of aberrant DNA repair mechanisms stratify ovarian cancer histotypes
YK Wang, A Bashashati, MS Anglesio, DR Cochrane, DS Grewal, G Ha, ...
Nature genetics 49 (6), 856, 2017
612017
Cis-regulatory somatic mutations and gene-expression alteration in B-cell lymphomas
A Mathelier, C Lefebvre, AW Zhang, DJ Arenillas, J Ding, WW Wasserman, ...
Genome biology 16 (1), 84, 2015
292015
Interfaces of malignant and immunologic clonal dynamics in ovarian cancer
AW Zhang, A McPherson, K Milne, DR Kroeger, PT Hamilton, A Miranda, ...
Cell 173 (7), 1755-1769. e22, 2018
252018
CuboCube: Student creation of a cancer genetics e-textbook using open-access software for social learning
P Seid-Karbasi, CY Xin, AW Zhang, N Gladish, SYS Cheng, K Rothe, ...
PLoS biology 15 (3), e2001192, 2017
42017
Probabilistic cell type assignment of single-cell transcriptomic data reveals spatiotemporal microenvironment dynamics in human cancers
AW Zhang, C O'Flanagan, E Chavez, JLP Lim, A McPherson, M Wiens, ...
bioRxiv, 521914, 2019
22019
Integrated structural variation and point mutation signatures in cancer genomes using correlated topic models
T Funnell, AW Zhang, D Grewal, S McKinney, A Bashashati, YK Wang, ...
PLoS computational biology 15 (2), e1006799, 2019
12019
Computational analysis of transcriptional regulation sites at the HTT gene locus
RAG De Souza, N Kosior, SB Thomson, A Mathelier, AW Zhang, ...
Journal of Huntington's disease 7 (3), 223-237, 2018
12018
Integrated single-nucleotide and structural variation signatures of DNA-repair deficient human cancers
T Funnell, A Zhang, YJ Shiah, D Grewal, R Lesurf, S McKinney, ...
bioRxiv, 267500, 2018
12018
The interface of malignant and immunologic clonal dynamics in high-grade serous ovarian cancer
AW Zhang, A McPherson, K Milne, DR Kroeger, PT Hamilton, A Miranda, ...
bioRxiv, 198101, 2017
12017
Spectrophotometric determination of the kinetic parameters of β-fructofuranosidase and the mechanism of inhibition by copper (II) sulfate
A Zhang, T Miao
12011
Cancer stemness, intratumoral heterogeneity, and immune response across cancers
A Miranda, PT Hamilton, AW Zhang, S Pattnaik, E Becht, A Mezheyeuski, ...
Proceedings of the National Academy of Sciences 116 (18), 9020-9029, 2019
2019
Properties of the immune microenvironment associated with clonal diversity in high-grade serous ovarian cancer
AW Zhang, A McPherson, A Roth, DR Kroeger, K Milne, WW Wasserman, ...
Cancer Research 76 (14 Supplement), 4136-4136, 2016
2016
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