Kyle E. Watters
Kyle E. Watters
Senior Bioengineer, Arbor Biotechnologies
Verified email at arbor.bio - Homepage
TitleCited byYear
SHAPE-Seq 2.0: systematic optimization and extension of high-throughput chemical probing of RNA secondary structure with next generation sequencing
D Loughrey, KE Watters, AH Settle, JB Lucks
Nucleic acids research 42 (21), e165-e165, 2014
912014
A renaissance in RNA synthetic biology: new mechanisms, applications and tools for the future
J Chappell, KE Watters, MK Takahashi, JB Lucks
Current opinion in chemical biology 28, 47-56, 2015
852015
Cotranscriptional folding of a riboswitch at nucleotide resolution
KE Watters, EJ Strobel, MY Angela, JT Lis, JB Lucks
Nature structural & molecular biology 23 (12), 1124, 2016
662016
The centrality of RNA for engineering gene expression
J Chappell, MK Takahashi, S Meyer, D Loughrey, KE Watters, J Lucks
Biotechnology journal 8 (12), 1379-1395, 2013
642013
Simultaneous characterization of cellular RNA structure and function with in-cell SHAPE-Seq
KE Watters, TR Abbott, JB Lucks
Nucleic acids research 44 (2), e12-e12, 2015
602015
Systematic discovery of natural CRISPR-Cas12a inhibitors
KE Watters, C Fellmann, HB Bai, SM Ren, JA Doudna
Science 362 (6411), 236-239, 2018
522018
Characterizing RNA structures in vitro and in vivo with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
KE Watters, MY Angela, EJ Strobel, AH Settle, JB Lucks
Methods 103, 34-48, 2016
432016
Comparative void-volume analysis of psychrophilic and mesophilic enzymes: structural bioinformatics of psychrophilic enzymes reveals sources of core flexibility
DI Paredes, K Watters, DJ Pitman, C Bystroff, JS Dordick
BMC structural biology 11 (1), 42, 2011
432011
RNA systems biology: uniting functional discoveries and structural tools to understand global roles of RNAs
EJ Strobel, KE Watters, D Loughrey, JB Lucks
Current opinion in biotechnology 39, 182-191, 2016
342016
Using in-cell SHAPE-Seq and simulations to probe structure–function design principles of RNA transcriptional regulators
MK Takahashi, KE Watters, PM Gasper, TR Abbott, PD Carlson, AA Chen, ...
Rna 22 (6), 920-933, 2016
242016
Broad-spectrum enzymatic inhibition of CRISPR-Cas12a
GJ Knott, BW Thornton, MJ Lobba, JJ Liu, B Al-Shayeb, KE Watters, ...
Nature structural & molecular biology 26 (4), 315, 2019
192019
Distributed biotin–streptavidin transcription roadblocks for mapping cotranscriptional RNA folding
EJ Strobel, KE Watters, Y Nedialkov, I Artsimovitch, JB Lucks
Nucleic acids research 45 (12), e109-e109, 2017
162017
Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements
KE Watters, K Choudhary, S Aviran, JB Lucks, KL Perry, JR Thompson
Nucleic acids research 46 (5), 2573-2584, 2017
142017
Controlling CRISPR-Cas9 with ligand-activated and ligand-deactivated sgRNAs
K Kundert, JE Lucas, KE Watters, C Fellmann, AH Ng, BM Heineike, ...
Nature communications 10 (1), 2127, 2019
122019
Mapping RNA structure in vitro with SHAPE chemistry and next-generation sequencing (SHAPE-Seq)
KE Watters, JB Lucks
RNA Structure Determination, 135-162, 2016
82016
Computationally Reconstructing Cotranscriptional RNA Folding Pathways from Experimental Data Reveals Rearrangement of Non-Native Folding Intermediates
MY Angela, PM Gasper, EJ Strobel, KE Watters, AA Chen, JB Lucks
bioRxiv, 379222, 2018
32018
Machine Learning Predicts New Anti-CRISPR Proteins
S Eitzinger, A Asif, KE Watters, AT Iavarone, GJ Knott, JA Doudna
bioRxiv, 854950, 2019
2019
Potent CRISPR-Cas9 inhibitors from Staphylococcus genomes
KE Watters, H Shivram, C Fellmann, RJ Lew, B McMahon, JA Doudna
bioRxiv, 799403, 2019
2019
The CRISPR Revolution: Potential Impacts on Global Health Security
K Watters
2018
SHAPE-Seq technologies for analyzing, understanding, and designing RNA structures and functions
KE Watters
Cornell University, 2016
2016
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Articles 1–20