Catherine Lozupone
Catherine Lozupone
Associate Professor of Medicine, University of Colorado, Denver
Verified email at
Cited by
Cited by
QIIME allows analysis of high-throughput community sequencing data
JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ...
Nature methods 7 (5), 335-336, 2010
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
Structure, function and diversity of the healthy human microbiome
nature 486 (7402), 207-214, 2012
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, CA Lozupone, ...
Proceedings of the national academy of sciences 108 (supplement_1), 4516-4522, 2011
UniFrac: a new phylogenetic method for comparing microbial communities
C Lozupone, R Knight
Applied and environmental microbiology 71 (12), 8228-8235, 2005
Human gut microbiome viewed across age and geography
T Yatsunenko, FE Rey, MJ Manary, I Trehan, MG Dominguez-Bello, ...
nature 486 (7402), 222-227, 2012
Obesity alters gut microbial ecology
RE Ley, F Bäckhed, P Turnbaugh, CA Lozupone, RD Knight, JI Gordon
Proceedings of the national academy of sciences 102 (31), 11070-11075, 2005
Diversity, stability and resilience of the human gut microbiota
CA Lozupone, JI Stombaugh, JI Gordon, JK Jansson, R Knight
Nature 489 (7415), 220-230, 2012
Evolution of mammals and their gut microbes
RE Ley, M Hamady, C Lozupone, PJ Turnbaugh, RR Ramey, JS Bircher, ...
science 320 (5883), 1647-1651, 2008
Soil bacterial and fungal communities across a pH gradient in an arable soil
J Rousk, E Bååth, PC Brookes, CL Lauber, C Lozupone, JG Caporaso, ...
The ISME journal 4 (10), 1340-1351, 2010
UniFrac: an effective distance metric for microbial community comparison
C Lozupone, ME Lladser, D Knights, J Stombaugh, R Knight
The ISME journal 5 (2), 169-172, 2011
Quantitative and qualitative β diversity measures lead to different insights into factors that structure microbial communities
CA Lozupone, M Hamady, ST Kelley, R Knight
Applied and environmental microbiology 73 (5), 1576-1585, 2007
A framework for human microbiome research
nature 486 (7402), 215-221, 2012
Worlds within worlds: evolution of the vertebrate gut microbiota
RE Ley, CA Lozupone, M Hamady, R Knight, JI Gordon
Nature Reviews Microbiology 6 (10), 776-788, 2008
Global patterns in bacterial diversity
CA Lozupone, R Knight
Proceedings of the National Academy of Sciences 104 (27), 11436-11440, 2007
Normalization and microbial differential abundance strategies depend upon data characteristics
S Weiss, ZZ Xu, S Peddada, A Amir, K Bittinger, A Gonzalez, C Lozupone, ...
Microbiome 5, 1-18, 2017
UniFrac–an online tool for comparing microbial community diversity in a phylogenetic context
C Lozupone, M Hamady, R Knight
BMC bioinformatics 7, 1-14, 2006
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
M Hamady, C Lozupone, R Knight
The ISME journal 4 (1), 17-27, 2010
Cohabiting family members share microbiota with one another and with their dogs
SJ Song, C Lauber, EK Costello, CA Lozupone, G Humphrey, ...
elife 2, e00458, 2013
Environmental and ecological factors that shape the gut bacterial communities of fish: a meta‐analysis
KE Sullam, SD Essinger, CA Lozupone, MP O’CONNOR, GL Rosen, ...
Molecular ecology 21 (13), 3363-3378, 2012
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