Adrian E Platts
Adrian E Platts
Dept. of Plant Biology, Michigan State University
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A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
P Cingolani, AE Platts, LL Wang, M Coon, T Nguyen, L Wang, SJ Land, ...
Fly 6 (2), 80-92, 2012
The butterfly plant arms-race escalated by gene and genome duplications
PP Edger, HM Heidel-Fischer, M Bekaert, J Rota, G Glöckner, AE Platts, ...
Proceedings of the National Academy of Sciences 112 (27), 8362-8366, 2015
The Capsella rubella genome and the genomic consequences of rapid mating system evolution
T Slotte, KM Hazzouri, JA Ågren, D Koenig, F Maumus, YL Guo, K Steige, ...
Nature genetics 45 (7), 831-835, 2013
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions
A Haudry, AE Platts, E Vello, DR Hoen, M Leclercq, RJ Williamson, ...
Nature genetics 45 (8), 891-898, 2013
Endonuclease-sensitive regions of human spermatozoal chromatin are highly enriched in promoter and CTCF binding sequences
A Arpanahi, M Brinkworth, D Iles, SA Krawetz, A Paradowska, AE Platts, ...
Genome research 19 (8), 1338-1349, 2009
Success and failure in human spermatogenesis as revealed by teratozoospermic RNAs
AE Platts, DJ Dix, HE Chemes, KE Thompson, R Goodrich, JC Rockett, ...
Human molecular genetics 16 (7), 763-773, 2007
The rice paradox: multiple origins but single domestication in Asian rice
JY Choi, AE Platts, DQ Fuller, RA Wing, MD Purugganan
Molecular biology and evolution 34 (4), 969-979, 2017
Subgenome dominance in an interspecific hybrid, synthetic allopolyploid, and a 140-year-old naturally established neo-allopolyploid monkeyflower
PP Edger, R Smith, MR McKain, AM Cooley, M Vallejo-Marin, Y Yuan, ...
The Plant Cell 29 (9), 2150-2167, 2017
Hybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris
GM Douglas, G Gos, KA Steige, A Salcedo, K Holm, EB Josephs, ...
Proceedings of the National Academy of Sciences 112 (9), 2806-2811, 2015
Evidence for widespread positive and negative selection in coding and conserved noncoding regions of Capsella grandiflora
RJ Williamson, EB Josephs, AE Platts, KM Hazzouri, A Haudry, ...
PLOS Genetics 10 (9), e1004622, 2014
Identification of human sperm transcripts as candidate markers of male fertility
C Lalancette, AE Platts, GD Johnson, BR Emery, DT Carrell, SA Krawetz
Journal of molecular medicine 87 (7), 735-748, 2009
Differential nuclear scaffold/matrix attachment marks expressed genes
AK Linnemann, AE Platts, SA Krawetz
Human molecular genetics 18 (4), 645-654, 2009
Secondary evolution of a self-incompatibility locus in the Brassicaceae genus Leavenworthia
SC Chantha, AC Herman, AE Platts, X Vekemans, DJ Schoen
PLOS Biology 11 (5), e1001560, 2013
The strength and pattern of natural selection on gene expression in rice
SC Groen, I Ćalić, Z Joly-Lopez, AE Platts, JY Choi, M Natividad, K Dorph, ...
Nature 578 (7796), 572-576, 2020
Improvement in the cast structure of Sm(2)Fe(17) alloys by niobium additions
AE Platts, IR Harris, JMD Coey
Journal of alloys and compounds 185 (2), 251-258, 1992
Real-time PCR quantification using a variable reaction efficiency model
AE Platts, GD Johnson, AK Linnemann, SA Krawetz
Analytical biochemistry 380 (2), 315-322, 2008
In-silico prediction and observations of nuclear matrix attachment
AE Platts, AK Quayle, SA Krawetz
Cellular & molecular biology letters 11 (2), 191-213, 2006
Reconfiguration of genomic anchors upon transcriptional activation of the human major histocompatibility complex
D Ottaviani, E Lever, R Mitter, T Jones, T Forshew, R Christova, ...
Genome research 18 (11), 1778-1786, 2008
Considerations when using Array Technologies for male factor assessment
AE Platts, DJ Dix, SA Krawetz
The Genetics of Male Infertility, 37-54, 2007
Tools and Approaches for an End-to-End Expression Array Analysis
AE Platts, SA Krawetz
Bioinformatics for Systems Biology, 227-265, 2009
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