Praneet Chaturvedi
Praneet Chaturvedi
Bioinformatics Lead @ Division of Developmental Biology and Center for Stem Cell and Organoid
Verified email at - Homepage
Cited by
Cited by
Differentiation of human pluripotent stem cells into colonic organoids via transient activation of BMP signaling
JO Múnera, N Sundaram, SA Rankin, D Hill, C Watson, M Mahe, ...
Cell stem cell 21 (1), 51-64. e6, 2017
Xenbase: a genomic, epigenomic and transcriptomic model organism database
K Karimi, JD Fortriede, VS Lotay, KA Burns, DZ Wang, ME Fisher, TJ Pells, ...
Nucleic acids research 46 (D1), D861-D868, 2018
Esophageal organoids from human pluripotent stem cells delineate Sox2 functions during esophageal specification
SL Trisno, KED Philo, KW McCracken, EM Catá, S Ruiz-Torres, ...
Cell Stem Cell 23 (4), 501-515. e7, 2018
Single cell transcriptomics identifies a signaling network coordinating endoderm and mesoderm diversification during foregut organogenesis
L Han, P Chaturvedi, K Kishimoto, H Koike, T Nasr, K Iwasawa, ...
Nature communications 11 (1), 1-16, 2020
Xenbase: Facilitating the Use of Xenopus to Model Human Disease
MJ Nenni, ME Fisher, C James-Zorn, TJ Pells, V Ponferrada, S Chu, ...
Frontiers in physiology 10, 154, 2019
Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database
JD Fortriede, TJ Pells, S Chu, P Chaturvedi, DZ Wang, ME Fisher, ...
Nucleic Acids Research 48 (D1), D776-D782, 2020
Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs
ML Stevens, P Chaturvedi, SA Rankin, M Macdonald, S Jagannathan, ...
Development 144 (7), 1283-1295, 2017
Differential miRNA expression in cells and matrix vesicles in vascular smooth muscle cells from rats with kidney disease
P Chaturvedi, NX Chen, K O’Neill, JN McClintick, SM Moe, SC Janga
PLoS One 10 (6), e0131589, 2015
ETS transcription factors Etv2 and Fli1b are required for tumor angiogenesis
K Baltrunaite, MP Craig, S Palencia Desai, P Chaturvedi, RN Pandey, ...
Angiogenesis 20 (3), 307-323, 2017
Sox17 and β-catenin co-occupy Wnt-responsive enhancers to govern the endoderm gene regulatory network
S Mukherjee, P Chaturvedi, SA Rankin, MB Fish, M Wlizla, KD Paraiso, ...
Elife 9, e58029, 2020
Identification of Osr2 transcriptional target genes in palate development
X Fu, J Xu, P Chaturvedi, H Liu, R Jiang, Y Lan
Journal of dental research 96 (12), 1451-1458, 2017
Osr1 functions downstream of Hedgehog pathway to regulate foregut development
L Han, J Xu, E Grigg, M Slack, P Chaturvedi, R Jiang, AM Zorn
Developmental biology 427 (1), 72-83, 2017
Glycosylphosphatidylinositol biosynthesis and remodeling are required for neural tube closure, heart development, and cranial neural crest cell survival
M Lukacs, T Roberts, P Chatuverdi, RW Stottmann
Elife 8, e45248, 2019
Disruption of a Hedgehog-Foxf1-Rspo2 signaling axis leads to tracheomalacia and a loss of Sox9+ tracheal chondrocytes
T Nasr, AM Holderbaum, P Chaturvedi, K Agarwal, JL Kinney, K Daniels, ...
Disease models & mechanisms 14 (2), dmm046573, 2021
TBX5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development
SA Rankin, JD Steimle, XH Yang, AB Rydeen, K Agarwal, P Chaturvedi, ...
Elife 10, e69288, 2021
Notch dimerization and gene dosage are important for normal heart development, intestinal stem cell maintenance, and splenic marginal zone B-cell homeostasis during mite …
FM Kobia, K Preusse, Q Dai, N Weaver, MR Hass, P Chaturvedi, SJ Stein, ...
PLoS biology 18 (10), e3000850, 2020
Gli3 utilizes Hand2 to synergistically regulate tissue-specific transcriptional networks
KH Elliott, X Chen, J Salomone, P Chaturvedi, PA Schultz, SK Balchand, ...
Elife 9, e56450, 2020
Progenitor translatome changes coordinated by Tsc1 increase perception of Wnt signals to end nephrogenesis
AE Jarmas, EW Brunskill, P Chaturvedi, N Salomonis, R Kopan
Nature communications 12 (1), 1-15, 2021
Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm diversification during foregut organogenesis
L Han, P Chaturvedi, K Kishimoto, H Koike, T Nasr, K Iwasawa, ...
BioRxiv, 756825, 2020
Uncovering RNA binding proteins associated with age and gender during liver maturation
P Chaturvedi, Y Neelamraju, W Arif, A Kalsotra, SC Janga
Scientific reports 5 (1), 1-10, 2015
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