Anton Arkhipov
Anton Arkhipov
Associate Investigator, Allen Institute for Brain Science
Verified email at - Homepage
Cited by
Cited by
Coarse-graining of condensed phase and biomolecular systems
GA Voth
CRC press, 2008
Molecular dynamics simulations of the complete satellite tobacco mosaic virus
PL Freddolino, AS Arkhipov, SB Larson, A McPherson, K Schulten
Structure 14 (3), 437-449, 2006
Architecture and membrane interactions of the EGF receptor
A Arkhipov, Y Shan, R Das, NF Endres, MP Eastwood, DE Wemmer, ...
Cell 152 (3), 557-569, 2013
Conformational coupling across the plasma membrane in activation of the EGF receptor
NF Endres, R Das, AW Smith, A Arkhipov, E Kovacs, Y Huang, JG Pelton, ...
Cell 152 (3), 543-556, 2013
Coarse grained protein− lipid model with application to lipoprotein particles
AY Shih, A Arkhipov, PL Freddolino, K Schulten
The Journal of Physical Chemistry B 110 (8), 3674-3684, 2006
Oncogenic mutations counteract intrinsic disorder in the EGFR kinase and promote receptor dimerization
Y Shan, MP Eastwood, X Zhang, ET Kim, A Arkhipov, RO Dror, J Jumper, ...
Cell 149 (4), 860-870, 2012
Imaging the migration pathways for O2, CO, NO, and Xe inside myoglobin
J Cohen, A Arkhipov, R Braun, K Schulten
Biophysical journal 91 (5), 1844-1857, 2006
Four-scale description of membrane sculpting by BAR domains
A Arkhipov, Y Yin, K Schulten
Biophysical journal 95 (6), 2806-2821, 2008
Stability and dynamics of virus capsids described by coarse-grained modeling
A Arkhipov, PL Freddolino, K Schulten
Structure 14 (12), 1767-1777, 2006
Transitions to catalytically inactive conformations in EGFR kinase
Y Shan, A Arkhipov, ET Kim, AC Pan, DE Shaw
Proceedings of the National Academy of Sciences 110 (18), 7270-7275, 2013
Classification of electrophysiological and morphological types in mouse visual cortex
NW Gouwens, SA Sorensen, J Berg, C Lee, T Jarsky, J Ting, SM Sunkin, ...
bioRxiv, 368456, 2018
Assembly of lipoprotein particles revealed by coarse-grained molecular dynamics simulations
AY Shih, PL Freddolino, A Arkhipov, K Schulten
Journal of structural biology 157 (3), 579-592, 2007
Classification of electrophysiological and morphological neuron types in the mouse visual cortex
NW Gouwens, SA Sorensen, J Berg, C Lee, T Jarsky, J Ting, SM Sunkin, ...
Nature neuroscience, 1, 2019
Simulations of membrane tubulation by lattices of amphiphysin N-BAR domains
Y Yin, A Arkhipov, K Schulten
Structure 17 (6), 882-892, 2009
Using VMD: an introductory tutorial
J Hsin, A Arkhipov, Y Yin, JE Stone, K Schulten
Current protocols in bioinformatics 24 (1), 5.7. 1-5.7. 48, 2008
Coarse-grained molecular dynamics simulations of a rotating bacterial flagellum
A Arkhipov, PL Freddolino, K Imada, K Namba, K Schulten
Biophysical Journal 91 (12), 4589-4597, 2006
Membrane-bending mechanism of amphiphysin N-BAR domains
A Arkhipov, Y Yin, K Schulten
Biophysical journal 97 (10), 2727-2735, 2009
EGFR oligomerization organizes kinase-active dimers into competent signalling platforms
SR Needham, SK Roberts, A Arkhipov, VP Mysore, CJ Tynan, ...
Nature communications 7 (1), 1-14, 2016
The role of molecular modeling in bionanotechnology
D Lu, A Aksimentiev, AY Shih, E Cruz-Chu, PL Freddolino, A Arkhipov, ...
Physical Biology 3 (1), S40, 2006
Squeezing protein shells: how continuum elastic models, molecular dynamics simulations, and experiments coalesce at the nanoscale
WH Roos, MM Gibbons, A Arkhipov, C Uetrecht, NR Watts, PT Wingfield, ...
Biophysical journal 99 (4), 1175-1181, 2010
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